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The map label for this gene is azlC [H]

Identifier: 29143879

GI number: 29143879

Start: 3678246

End: 3678905

Strand: Direct

Name: azlC [H]

Synonym: t3578

Alternate gene names: 29143879

Gene position: 3678246-3678905 (Clockwise)

Preceding gene: 29143877

Following gene: 29143880

Centisome position: 76.76

GC content: 57.73

Gene sequence:

>660_bases
ATGAAACACTATTTTTCCTGTCTCAAGGGAGACACGATAAAAGCGATATTTTTAGTGTGCCTGGCCGTGGGCGTCGTCGG
CATGTCCTATGGCTCACTGGCGATGGCCTACGGTTTCCCACTGTGGGTGCCGTTTGTCCTCTCTATTTTTGTGCTGGCGG
GCGCGTCCGAATTTATGTTTATCGGCATTGTTGCCAGCGGCGGCAATCCGTTAGCGGCGGCGGCGGCAGGACTACTGGTG
AATGCGCGCCACGTGCCGTTTGGCGTAACGGTGCGCGATTTGGTTGGCACCCGCGCCGCCAGCTTTTTCGGCTGCCATAT
CATGAATGATGAGAGCGTGGTGTTCGGCCTGTCGCAAAAAACACCCGAACAACGTAAAGCCGCCTACTGGCTATGCGGTC
TGGGCGTCGCCCTATTCTGGCCGATTGGCACACTGATTGGCGCAGGTGTCGGCAAACTGCTCCCGGCCCCAGAAACCATC
GGTCTGGACGCCGTATTCCCGGCAATCTTACTGGCGCTGGTGATCCCGGCGTTTAAAAACCGCACCACATTGATTCGTGG
TTGCAGCGGCGCCGCGCTGTCGCTTGCCGCCGTTCCCTTTGTGGCTGCCGGATTGCCGGTGTTGCTTTCGCTGCTTGGCC
TACTGGCGAGGAAAAAATAA

Upstream 100 bases:

>100_bases
AAAGCATCCAACGTTCACTATAACGAACGAAATGTTCGTCTTGTAAAGCAAATCTGTTCCGTTCATTATAATGAAAATTC
GTTCGATATGACTAAAGAAG

Downstream 100 bases:

>100_bases
TGGGCAATATGACGCTATTTATTATCGGTATTGCTCTTTTATCTACGGGAACCTATTTGATGCGCCTCGGCGGCGCGAAA
CTTGGCAGCCGTCTGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLV
NARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETI
GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK

Sequences:

>Translated_219_residues
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLV
NARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETI
GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK
>Mature_219_residues
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLV
NARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETI
GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK

Specific function: Involved in branched-chain amino acid transport [H]

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 22766; Mature: 22766

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMF
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
IGIVASGGNPLAAAAAGLLVNARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQK
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCC
TPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETIGLDAVFPAILLALVIPAFKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
RTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK
CCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMF
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
IGIVASGGNPLAAAAAGLLVNARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQK
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCC
TPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETIGLDAVFPAILLALVIPAFKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
RTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK
CCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]