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The map label for this gene is yjaH [H]

Identifier: 29143774

GI number: 29143774

Start: 3550508

End: 3551200

Strand: Reverse

Name: yjaH [H]

Synonym: t3460

Alternate gene names: 29143774

Gene position: 3551200-3550508 (Counterclockwise)

Preceding gene: 29143775

Following gene: 29143772

Centisome position: 74.11

GC content: 54.83

Gene sequence:

>693_bases
GTGAACAGTTTTATCGAAGGGGCTTGTCAGCCCCTTTTGTCCGTCTGGCGTCGCGCGTTTCTGTTTTCTGGCGCGCTGTT
GCTGACTGCCTGCAGTCATAACGCTTCACCGCCTCCGTTTACTGCCAGCGGCTTTGCCGGCGATCACGGCGCGGTGCGTA
TCTGGCGTAAAGATACGAACGATGAAGTCCATCTGCTTTCTGTTTTTAGCCCGTGGCATAGTGGTAGCACGACGACCAGC
GAATATCGTTGGCAGGGTGATACGCTTTCGCTTATTGAACTCAATATTTACAGCAAACCGCCAGAACATATTCGCGCGCG
TTTCGACGCTCATGGCGAACTCAGTTTTATGCAGCGTGAAGTCGGGGGGCAGAAGCAGCAGCTTTCCAACGATCAGATTG
CCTTGTATCGCTATCGTGCCGAACAAATCCGTCAGACCAGCGACGCATTGCGCCTGGGGCGGGTCATACTACGCCAGGGA
CGCTGGCACGCCGACCATACGGTAACCACCTGTGAAGGTGAAACGCTGAAACCGGATCTGGATTCTTGGGCAATAAGCCA
CATTGAGCGCCGCCAGAACCACTCATCGGTAGAGGTGAGCGTAGCATGGCTGGAGGCGCCGGAAGGATCGCAACTTTTGC
TGGTGGCGAATTCAGATTTCTGTCACTGGCAGCCGCAAGCGAAAACCTTTTGA

Upstream 100 bases:

>100_bases
ACCCACAGACCGGTAAAGAAATCAAAATCGCCGCCGCTAACGTACCGGCGTTTGTTTCTGGTAAAGCTCTGAAAGACGCA
GTTAAGTAAGACGCGTAACT

Downstream 100 bases:

>100_bases
TGGAATACCGAATGGCGAAGCCGCCATTCGGCAAACATGCTTTACCAGTTTCCCATACCCATATGACCGCCGCCGCGATG
ATAACCGCCGCCATAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNSFIEGACQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTNDEVHLLSVFSPWHSGSTTTS
EYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQREVGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQG
RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKTF

Sequences:

>Translated_230_residues
MNSFIEGACQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTNDEVHLLSVFSPWHSGSTTTS
EYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQREVGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQG
RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKTF
>Mature_230_residues
MNSFIEGACQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTNDEVHLLSVFSPWHSGSTTTS
EYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQREVGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQG
RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790434, Length=231, Percent_Identity=77.4891774891775, Blast_Score=378, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010858
- InterPro:   IPR012640
- InterPro:   IPR016500 [H]

Pfam domain/function: PF07356 DUF1481; PF08139 VirB [H]

EC number: NA

Molecular weight: Translated: 26040; Mature: 26040

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFIEGACQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTN
CCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
DEVHLLSVFSPWHSGSTTTSEYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQRE
CCEEEEEEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHH
VGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQGRWHADHTVTTCEGETLKPDL
HCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCH
DSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKTF
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MNSFIEGACQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTN
CCHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
DEVHLLSVFSPWHSGSTTTSEYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQRE
CCEEEEEEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHH
VGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQGRWHADHTVTTCEGETLKPDL
HCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCH
DSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKTF
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]