| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is dam [C]
Identifier: 29143730
GI number: 29143730
Start: 3505322
End: 3506179
Strand: Direct
Name: dam [C]
Synonym: t3409
Alternate gene names: 29143730
Gene position: 3505322-3506179 (Clockwise)
Preceding gene: 29143729
Following gene: 29143731
Centisome position: 73.15
GC content: 46.39
Gene sequence:
>858_bases ATGAGCACCATCCTGAAATGGGCGGGAAATAAAACTGCCATAATGTCCGAACTGAAAAAACATCTTCCTGCTGGCCCGCG ACTGGTTGAACCTTTCGCGGGTTCCTGTGCTGTGATGATGGAGACGGATTATCCCAGCTATCTGGTTGCGGATATTAATC CTGATTTAATCAACCTCTATAAAAAGGTTGCCGCTGATTGTGAATCGTTTATATCTCGCGCCAGAGTTTTATTTGAGATC GCAAACAGGGAGGTGGCTTATTACAACATAAGGCAGGAGTTTAATTACTCAACTGAAATTACTGATTTCATGAAAGCGGT ATATTTCCTGTATCTCAATCGTCATGGTTACCGTGGGTTATGTCGTTATAACAAGAGCGGGCATTTCAACATTCCATACG GTAATTATAAAAATCCGTATTTCCCTGAAAAAGAAATTCGCGCATTTGCAGAGAAAGCCCAGCAAGCAACGTTTATCTGC GCCAGCTTTGATGAAACGCTGGCGATGCTGCAGGTGGGGGATGTGGTGTATTGCGATCCGCCTTATGACGGTACGTTTTC CGGCTATCACACTAACGGCTTCACTGAAGATGACCAGTATCACCTGGCATCTGTTCTTGAATATCGATCATCAGAAGGTC ATCCAGTCATTGTTTCTAACAGTGACACATCCCTGATCCGTTCGCTGTATCGAAATTTCACTCACCACTACATCAAGGCA AAACGCAGCATCGGCGTGTCGGCTGGCGAGAGTAAATCTGCAACAGAAATCATCGCTGTTTCTGGGGCGCGCTGCTGGGT GGGATTTGATCCTTCGCGTGGCGTGGATAGTTCTGCCGTGTACGGAGTGCGTGCATGA
Upstream 100 bases:
>100_bases TTCCGCCAGCACGCCGCCGTGCCATTCCGGGTGTGCAGCTTTGCATTACCTGTCAGGAAATCGCAGAGCTGAAAGGCAAA CATTACAACGGAGGTGCTGT
Downstream 100 bases:
>100_bases GCCATGCTGATATGAACAACTGCAGCGGCTTTAACGAGGCCGCCGCAGCATTCTCATGGAACAGCCCGAAAAAGGCTATT AACCCTTATCTGGACCTGGC
Product: DNA adenine methylase
Products: NA
Alternate protein names: M.Eco67Dam; ORF1-EC67 DAM [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSTILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLYKKVAADCESFISRARVLFEI ANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQQATFIC ASFDETLAMLQVGDVVYCDPPYDGTFSGYHTNGFTEDDQYHLASVLEYRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKA KRSIGVSAGESKSATEIIAVSGARCWVGFDPSRGVDSSAVYGVRA
Sequences:
>Translated_285_residues MSTILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLYKKVAADCESFISRARVLFEI ANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQQATFIC ASFDETLAMLQVGDVVYCDPPYDGTFSGYHTNGFTEDDQYHLASVLEYRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKA KRSIGVSAGESKSATEIIAVSGARCWVGFDPSRGVDSSAVYGVRA >Mature_284_residues STILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLYKKVAADCESFISRARVLFEIA NREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQQATFICA SFDETLAMLQVGDVVYCDPPYDGTFSGYHTNGFTEDDQYHLASVLEYRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKAK RSIGVSAGESKSATEIIAVSGARCWVGFDPSRGVDSSAVYGVRA
Specific function: Methylates DNA within the sequence GATC and protects the DNA from cleavage by the restriction endonuclease MboI. May play a regulatory role in the functions of the retron [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=264, Percent_Identity=46.969696969697, Blast_Score=241, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32129; Mature: 31997
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLY CCCCCHHCCCHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCEEEECCCHHHHHHH KKVAADCESFISRARVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGL HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCE CRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQQATFICASFDETLAMLQVGDVVYCDP EEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHCCCEEEECC PYDGTFSGYHTNGFTEDDQYHLASVLEYRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKA CCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH KRSIGVSAGESKSATEIIAVSGARCWVGFDPSRGVDSSAVYGVRA HHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEECC >Mature Secondary Structure STILKWAGNKTAIMSELKKHLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLY CCCCHHCCCHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCEEEECCCHHHHHHH KKVAADCESFISRARVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYRGL HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCE CRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQQATFICASFDETLAMLQVGDVVYCDP EEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHCCCEEEECC PYDGTFSGYHTNGFTEDDQYHLASVLEYRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKA CCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH KRSIGVSAGESKSATEIIAVSGARCWVGFDPSRGVDSSAVYGVRA HHHCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1701261 [H]