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The map label for this gene is cI

Identifier: 29143723

GI number: 29143723

Start: 3502576

End: 3503145

Strand: Reverse

Name: cI

Synonym: t3402

Alternate gene names: NA

Gene position: 3503145-3502576 (Counterclockwise)

Preceding gene: 29143733

Following gene: 29143722

Centisome position: 73.1

GC content: 39.65

Gene sequence:

>570_bases
ATGAATTTGGAGAAAGGCGGACGAGGCGCTATAGAGCGCATGGTAGAAGCTTATGGATTCAAAACTCGACAGGCGTTGTG
CGATCATTTAGGAATCTCTAAAAGTACACTCGCCACACGCTACATGCGTGACTCATTCCCAGCAGAATGGGTAATCCAGT
GCGCCCTTGAAACGGGCACCTCGCTTAATTGGCTCACAACCGGACATGGTTCAAAGCAAACTTCAGGTAATACAAATACT
ATGGAAGTTGCTAAATATGTATTATCTGATGGTGCCTTGCGTGAAGACGGTTTTTATATTTTTGATAAGGGATTTCTACC
CTCTACGTTTAAAAAACCTTTTGTCATCACAGATAACAATTCTGAATTTATTTGTGATAAAGAATTTGATGATATACGTG
ATGGTAAATGGGTAATAAGTATTGATGGCGAAGTAACGATCCGTGACATTACTCGTTTACCCGGTGGAAGAATCTTCGTC
GAGGGTGGAAACAGAGCCTTCGAATGTAAGATAGAAGACATTGAAATAATTGGTAAAATTATAAGTTTAACAGTCAAGTA
TGTTAAATAG

Upstream 100 bases:

>100_bases
GATTAATCAGGACGAATACGGATCGTTTGTATTTTGTGAACACCATAAACATACGATCGCGCAATGAAATCGTCAAGATA
AAAGTTCACTTGGAGTGACC

Downstream 100 bases:

>100_bases
TACCGGGAGGAAACTATGCTTGGTAAGGTATTTTTTGTGGTTTTGTCATGTTCTTTGTTATTAAACCCACTAACTACCTA
TGCTAGAAATTATCCCTGCT

Product: repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNT
MEVAKYVLSDGALREDGFYIFDKGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
EGGNRAFECKIEDIEIIGKIISLTVKYVK

Sequences:

>Translated_189_residues
MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNT
MEVAKYVLSDGALREDGFYIFDKGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
EGGNRAFECKIEDIEIIGKIISLTVKYVK
>Mature_189_residues
MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNT
MEVAKYVLSDGALREDGFYIFDKGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
EGGNRAFECKIEDIEIIGKIISLTVKYVK

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010744 [H]

Pfam domain/function: PF07022 Phage_CI_repr [H]

EC number: NA

Molecular weight: Translated: 21195; Mature: 21195

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGT
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
SLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYIFDKGFLPSTFKKPFVITDNN
CEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEECCC
SEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFVEGGNRAFECKIEDIEIIGKI
CCEEECCCCCCCCCCCEEEEECCEEEEEEHHCCCCCEEEEECCCEEEEEEEHHHHHHHHH
ISLTVKYVK
HHHEEEECC
>Mature Secondary Structure
MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGT
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC
SLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYIFDKGFLPSTFKKPFVITDNN
CEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEECCC
SEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFVEGGNRAFECKIEDIEIIGKI
CCEEECCCCCCCCCCCEEEEECCEEEEEEHHCCCCCEEEEECCCEEEEEEEHHHHHHHHH
ISLTVKYVK
HHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]