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The map label for this gene is rffC [H]

Identifier: 29143695

GI number: 29143695

Start: 3472972

End: 3473520

Strand: Reverse

Name: rffC [H]

Synonym: t3373

Alternate gene names: 29143695

Gene position: 3473520-3472972 (Counterclockwise)

Preceding gene: 29143696

Following gene: 29143694

Centisome position: 72.49

GC content: 58.65

Gene sequence:

>549_bases
GTGCAGGCAAAAGTGCCGGCTGAAAACATCGCCTGGCTGTCGGCGTTGCAATCGCTGGGATTCTCTTTGGTTGAAGGCGA
GGTGGATTTTGCGTTGCCGGTAAAAGGGCATCGCGACCAGCATGGCGCGGAAATTGCACATCTTACGGACATTCCTGCTT
TGCGTCAGTTGGCCGGAGAGGCGTTTACGCAGAGTCGTTTTCGCGCGCCGTGGTATGCGCCCGACGCCAGCGCCCGTTTT
TACGCCCAGTGGATTGAGAATGCGGTACGCGGCACGTTTGATCACCAATGCCTGGTGCTTCGCACGGAGACAGGCGCTAT
CCGTGGTTACGTCTCGCTGCGGGAATTGAATGATACCGACGTGCGCATTGGCCTGTTGGCCGGACGCGGCGCGGGAGCGG
AACTTATGCAGGCGGCGATCTGTTGGGCGCAGAGTCGCGGCAAAGCAACATTGCGGGTGGCGACCCAGTTGGGCAACACC
GCCGCGCTTAAACGTTACATACAAAGCGGTGCCAACATCGAAAGCACTGCGTACTGGTTATACAGGTGA

Upstream 100 bases:

>100_bases
ACACTGGGAAAATACGTTCTTTGGCGTGAATAGCGGCATTGTGCGTATCGATGCCTCAGCGCCCGAATTAACGCCAGAAG
CGCTGCAGGCATGGCAACGC

Downstream 100 bases:

>100_bases
CAACATGATTCCTTTTAATGCGCCGCCGGTGGTGGGAACCGAACTCGAATACATGCAGTCTGCAATGAGCAGCGGCAAAC
TGTGCGGCGACGGCGGCTTT

Product: TDP-fucosamine acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MQAKVPAENIAWLSALQSLGFSLVEGEVDFALPVKGHRDQHGAEIAHLTDIPALRQLAGEAFTQSRFRAPWYAPDASARF
YAQWIENAVRGTFDHQCLVLRTETGAIRGYVSLRELNDTDVRIGLLAGRGAGAELMQAAICWAQSRGKATLRVATQLGNT
AALKRYIQSGANIESTAYWLYR

Sequences:

>Translated_182_residues
MQAKVPAENIAWLSALQSLGFSLVEGEVDFALPVKGHRDQHGAEIAHLTDIPALRQLAGEAFTQSRFRAPWYAPDASARF
YAQWIENAVRGTFDHQCLVLRTETGAIRGYVSLRELNDTDVRIGLLAGRGAGAELMQAAICWAQSRGKATLRVATQLGNT
AALKRYIQSGANIESTAYWLYR
>Mature_182_residues
MQAKVPAENIAWLSALQSLGFSLVEGEVDFALPVKGHRDQHGAEIAHLTDIPALRQLAGEAFTQSRFRAPWYAPDASARF
YAQWIENAVRGTFDHQCLVLRTETGAIRGYVSLRELNDTDVRIGLLAGRGAGAELMQAAICWAQSRGKATLRVATQLGNT
AALKRYIQSGANIESTAYWLYR

Specific function: Transaminase converting thymidine diphosphate(TDP)-4- keto-6-deoxy-D-glucose to TDP-4-amino-4,6-dideoxy-D-galactose, the immediate precursor of the ECA sugar TDP-Fuc4NAc [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI145693203, Length=182, Percent_Identity=78.5714285714286, Blast_Score=288, Evalue=1e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR012752
- InterPro:   IPR016181
- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 20019; Mature: 20019

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKVPAENIAWLSALQSLGFSLVEGEVDFALPVKGHRDQHGAEIAHLTDIPALRQLAGE
CCCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCEEHHHHCCHHHHHHHHH
AFTQSRFRAPWYAPDASARFYAQWIENAVRGTFDHQCLVLRTETGAIRGYVSLRELNDTD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCCC
VRIGLLAGRGAGAELMQAAICWAQSRGKATLRVATQLGNTAALKRYIQSGANIESTAYWL
EEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCCCEEEE
YR
EC
>Mature Secondary Structure
MQAKVPAENIAWLSALQSLGFSLVEGEVDFALPVKGHRDQHGAEIAHLTDIPALRQLAGE
CCCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCEEHHHHCCHHHHHHHHH
AFTQSRFRAPWYAPDASARFYAQWIENAVRGTFDHQCLVLRTETGAIRGYVSLRELNDTD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCCC
VRIGLLAGRGAGAELMQAAICWAQSRGKATLRVATQLGNTAALKRYIQSGANIESTAYWL
EEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHCCCCCCCCEEEE
YR
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1379743; 9278503; 8366065 [H]