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The map label for this gene is rffT [H]

Identifier: 29143691

GI number: 29143691

Start: 3468154

End: 3469512

Strand: Reverse

Name: rffT [H]

Synonym: t3369

Alternate gene names: 29143691

Gene position: 3469512-3468154 (Counterclockwise)

Preceding gene: 29143692

Following gene: 29143690

Centisome position: 72.4

GC content: 51.51

Gene sequence:

>1359_bases
ATGAGTTTAATGCAATTCAGCGGGCTGCTGGTGGTCTGGCTGCTCTCTACGCTGTTTATCGCCACGCTGACTTGGTTTGA
ATTCCGCCGCGTGCGTTTTAACTTCAACGTTTTCTTTTCGTTGCTTTTTTTGTTGACCTTCTTTTTTGGTTTTCCGCTAA
CCAGCGTGCTGGTATTTCGTTTCGACGTTGGCGTCGCGCCGCCGGAAATCTTATTGCAGGCTCTATTATCCGCCGCCTGT
TTCTACGGCGTGTATTACGTGACCTATAAAACGCGTTTACGCAAACGCGTTGTGGATGTACCACGCAAGCCGCTATTTAC
CATGAACCGGGTGGAAACCCACCTTACCTGGGTGATCCTGATGGGCATCGCGCTGGTGAGCGTGGCGATTTTCTTTATGC
ATAACGGCTTTTTGCTGTTCCGACTACACTCCTACAGCCAGATCTTTTCCAGCGAAGTTTCCGGCGTGGCGTTAAAACGG
TTCTTCTATTTCTTCATTCCGGCGATGCTGGTGGTCTATTTCCTGCGCCAGGACAGCAAAGCGTGGCTGTTCTTTCTGGT
GAGCACCGTCGCGTTTGGTCTGTTGACCTACATGATTGTCGGCGGCACGCGCGCCAACATCATTATTGCGTTTGCTATCT
TCCTGTTTATCGGCATTATTCGGGGCTGGATCAGCCTGTGGATGCTGGCAGCGGCGGGCGTGCTGGGGATTGTCGGTATG
TTCTGGCTGGCGCTCAAACGCTACGGATTAAATGTGAGCGGCGATGAGGCGTTCTATACGTTTCTTTATCTGACGCGCGA
TACCTTTTCGCCGTGGGAGAATCTGGCGCTGCTGTTGCAAAATTACCACAATATCGATTTTCAGGGGCTGGCCCCTATCG
TGCGTGATTTCTACGTCTTTATTCCTACCTGGTTATGGCCGGGACGACCCAGTATCGTGCTGAATTCTGCGAATTACTTC
ACCTGGGAAGTCCTGAACAACCATTCTGGCTTGGCGATATCGCCAACGCTTATCGGATCGCTGGTGGTCATGGGCGGGGC
ACTGTTTATTCCGCTCGGCGCGATCGTCGTCGGGCTGATTATCAAATGGTTCGACTGGCTGTATGAACTGGGTAACCGGG
AACCCAATCGCTATAAGGCGGCGATTCTGCACAGTTTCTGCTTTGGCGCCATCTTTAATATGATTGTGCTGGCGCGAGAA
GGGCTGGATTCGTTTGTTTCGCGCGTGGTTTTCTTCCTGGTGGTTTTTGGCGCCAGCCTGCTGGTCGCTAAACTTCTGTT
CTGGTTATTTGATAGCGCCGGACTGATTCATAAACGTACAACTTCGCTCCCTCAGGCACAGATGGATGGAAAACTATGA

Upstream 100 bases:

>100_bases
GTCAGCTCGCATCGGTAGATAAAAGCGGCATCACCTTCTTTAGCCCCAACTACCTGCAACCGTGGCATAATGCGTTGAGA
ATCGCCGCAGGAGAAGCCGA

Downstream 100 bases:

>100_bases
CCAATAATGCCGCTGCGCCCCTTTACTCGCTGCGTGGATTACCTCTGATTGGCTGGCGCGACATGTCACATGCGCTGAAT
TATCTGTTTGCCGATGGTCA

Product: common antigen polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSLMQFSGLLVVWLLSTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAAC
FYGVYYVTYKTRLRKRVVDVPRKPLFTMNRVETHLTWVILMGIALVSVAIFFMHNGFLLFRLHSYSQIFSSEVSGVALKR
FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGM
FWLALKRYGLNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYHNIDFQGLAPIVRDFYVFIPTWLWPGRPSIVLNSANYF
TWEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIFNMIVLARE
GLDSFVSRVVFFLVVFGASLLVAKLLFWLFDSAGLIHKRTTSLPQAQMDGKL

Sequences:

>Translated_452_residues
MSLMQFSGLLVVWLLSTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAAC
FYGVYYVTYKTRLRKRVVDVPRKPLFTMNRVETHLTWVILMGIALVSVAIFFMHNGFLLFRLHSYSQIFSSEVSGVALKR
FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGM
FWLALKRYGLNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYHNIDFQGLAPIVRDFYVFIPTWLWPGRPSIVLNSANYF
TWEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIFNMIVLARE
GLDSFVSRVVFFLVVFGASLLVAKLLFWLFDSAGLIHKRTTSLPQAQMDGKL
>Mature_451_residues
SLMQFSGLLVVWLLSTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAACF
YGVYYVTYKTRLRKRVVDVPRKPLFTMNRVETHLTWVILMGIALVSVAIFFMHNGFLLFRLHSYSQIFSSEVSGVALKRF
FYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGMF
WLALKRYGLNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYHNIDFQGLAPIVRDFYVFIPTWLWPGRPSIVLNSANYFT
WEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIFNMIVLAREG
LDSFVSRVVFFLVVFGASLLVAKLLFWLFDSAGLIHKRTTSLPQAQMDGKL

Specific function: Could be involved in ECA polysaccharide chain elongation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzyE family [H]

Homologues:

Organism=Escherichia coli, GI2367288, Length=450, Percent_Identity=94, Blast_Score=805, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010691 [H]

Pfam domain/function: PF06899 WzyE [H]

EC number: NA

Molecular weight: Translated: 51652; Mature: 51521

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCHHHHHCCCCCHHCCCCC
>Mature Secondary Structure 
SLMQFSGLLVVWLLSTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHCCCCCHHHHHCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA