| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is tatB [H]
Identifier: 29143649
GI number: 29143649
Start: 3423851
End: 3424399
Strand: Reverse
Name: tatB [H]
Synonym: t3323
Alternate gene names: 29143649
Gene position: 3424399-3423851 (Counterclockwise)
Preceding gene: 29143650
Following gene: 29143648
Centisome position: 71.46
GC content: 54.46
Gene sequence:
>549_bases GTGTTTGATATCGGTTTTAGCGAACTGCTGTTAGTGTTCGTTATCGGCCTCATTGTGTTGGGGCCGCAACGATTGCCAGT AGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGCTCCCTTGCGACAACGGTTCAGAATGAACTGACTCAGGAAC TGAAACTTCAGGAGTTCCAGGACAGTCTGAAAAAAGTCGAAAAGGCGAGCCTGGAAAATCTGACTCCCGAACTGAAAGCA TCTATGGATGAACTGCGTCAGGCGGCGGAGTCGATGAAACGCACCTACAGCGCTAACGATCCCGAACAAGCGAGCGATGA AGCGCATACCATCCATAATCCGGTGGTAAAAGGGAACGAAACGCAGCATGAGGGCGTCACCCCTGCCGCCGCTGAAACAC AGGCGAGCGCGCCGGAACAAAAGCCGGAGCCCGTTAAAGCTAACGTGCCTGAGTCGACGGAAACCGCTTCCGTAGCCGCG ATAGACGCCGAGAAGAAATCCGCTGCGCCTGTTGTCGAATCTTCCCCCTCGTCGAGTGATAAACCGTAA
Upstream 100 bases:
>100_bases CAGTCAGGACGCTGATTTTACCGCTAAATCTATCGCGGATAAGCAAGGCGAAGCGAAAAAGGAAGACGCTAAAAGCCAAG ATAAAGAGCAGGTATAATCC
Downstream 100 bases:
>100_bases ACATGGCTGTAGAAGATACTCAACCGCTTATCACGCATCTGATCGAGTTGCGTAAGCGCCTGCTAAACTGCATCGTCGCA GTACTTCTGATTTTTCTGGC
Product: sec-independent translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLENLTPELKA SMDELRQAAESMKRTYSANDPEQASDEAHTIHNPVVKGNETQHEGVTPAAAETQASAPEQKPEPVKANVPESTETASVAA IDAEKKSAAPVVESSPSSSDKP
Sequences:
>Translated_182_residues MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLENLTPELKA SMDELRQAAESMKRTYSANDPEQASDEAHTIHNPVVKGNETQHEGVTPAAAETQASAPEQKPEPVKANVPESTETASVAA IDAEKKSAAPVVESSPSSSDKP >Mature_182_residues MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLENLTPELKA SMDELRQAAESMKRTYSANDPEQASDEAHTIHNPVVKGNETQHEGVTPAAAETQASAPEQKPEPVKANVPESTETASVAA IDAEKKSAAPVVESSPSSSDKP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
Organism=Escherichia coli, GI48994984, Length=182, Percent_Identity=81.8681318681319, Blast_Score=288, Evalue=2e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19571; Mature: 19571
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLKKVEKASLENLTPELKASMDELRQAAESMKRTYSANDPEQASDEAHTIHNPVVKGNE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCCC TQHEGVTPAAAETQASAPEQKPEPVKANVPESTETASVAAIDAEKKSAAPVVESSPSSSD CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCC KP CC >Mature Secondary Structure MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSLKKVEKASLENLTPELKASMDELRQAAESMKRTYSANDPEQASDEAHTIHNPVVKGNE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCCC TQHEGVTPAAAETQASAPEQKPEPVKANVPESTETASVAAIDAEKKSAAPVVESSPSSSD CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCC KP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA