Click here to switch to the map view.

The map label for this gene is sspA [H]

Identifier: 29143592

GI number: 29143592

Start: 3350558

End: 3351196

Strand: Reverse

Name: sspA [H]

Synonym: t3259

Alternate gene names: 29143592

Gene position: 3351196-3350558 (Counterclockwise)

Preceding gene: 29143593

Following gene: 29143591

Centisome position: 69.93

GC content: 52.11

Gene sequence:

>639_bases
ATGGCTGTCGCTGCCAACAAACGTTCGGTAATGACGCTGTTTTCTGGTCCTACTGACATCTATAGCCATCAGGTCCGCAT
TGTGTTGGCTGAAAAGGGTGTTAGTTTTGAGATCGAACATGTGGAAAAGGACAATCCACCTCAGGATCTGATTGACCTCA
ACCCGAATCAAAGCGTTCCGACACTGGTGGATCGTGAGCTGACCCTGTGGGAATCTCGCATCATTATGGAATATCTGGAT
GAGCGTTTCCCCCATCCGCCGCTGATGCCGGTTTATCCGGTCGCGCGCGGTGAAAGCCGTCTGTACATGCACCGTATTGA
AAAAGACTGGTATACGCTGATGAACGTCATCGTAAACGGGTCTGCTTCCGAGGTCGACTCTGCGCGTAAACAACTGCGTG
AAGAGCTGCTGGCGATTGCGCCGGTATTTGGTCAGAAACCGTATTTCCTGAGCGACGAATTCAGCCTGGTTGATTGCTAC
CTGGCGCCTCTCCTGTGGCGTTTACCGCAGTTGGGTATCGAATTCAGCGGCGCAGGGGCGAAAGAGCTGAAAGGCTATAT
GACCCGCGTCTTTGAACGTGATTCTTTCCTGGCTTCTTTAACCGAAGCTGAACGTGAAATGCGCCTCGGTCGGGGTTAA

Upstream 100 bases:

>100_bases
CTGAGCAATGATGGCTTTTTTCGCCCTGGGTGACATAACATCTGGCTGGTCACATTGTGGCTGGTAGCAGTAAAAATTCT
GAATATACCTGGAGGTTTTC

Downstream 100 bases:

>100_bases
CCTGTATGGATTTGTCACAGTTGACGCCGCGTCGTCCCTATCTGTTGCGTGCTTTCTACGAGTGGTTGCTGGATAACCAG
TTGACCCCGCATCTGGTGGT

Product: stringent starvation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLD
ERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNVIVNGSASEVDSARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
LAPLLWRLPQLGIEFSGAGAKELKGYMTRVFERDSFLASLTEAEREMRLGRG

Sequences:

>Translated_212_residues
MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLD
ERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNVIVNGSASEVDSARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
LAPLLWRLPQLGIEFSGAGAKELKGYMTRVFERDSFLASLTEAEREMRLGRG
>Mature_211_residues
AVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDE
RFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNVIVNGSASEVDSARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYL
APLLWRLPQLGIEFSGAGAKELKGYMTRVFERDSFLASLTEAEREMRLGRG

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789624, Length=212, Percent_Identity=97.1698113207547, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 24277; Mature: 24146

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVP
CCCCCCCCCEEEEECCCHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHEECCCCCCCC
TLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNVIVNG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCC
SASEVDSARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGAGA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCEEECCCCH
KELKGYMTRVFERDSFLASLTEAEREMRLGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVP
CCCCCCCCEEEEECCCHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHEECCCCCCCC
TLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNVIVNG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCC
SASEVDSARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGAGA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCEEECCCCH
KELKGYMTRVFERDSFLASLTEAEREMRLGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]