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The map label for this gene is gatB [H]

Identifier: 29143515

GI number: 29143515

Start: 3271263

End: 3271547

Strand: Direct

Name: gatB [H]

Synonym: t3179

Alternate gene names: 29143515

Gene position: 3271263-3271547 (Clockwise)

Preceding gene: 29143514

Following gene: 29143516

Centisome position: 68.27

GC content: 49.12

Gene sequence:

>285_bases
ATGAAACGTAAAGTAATTGTGGCCTGTGGCGGTGCGGTTGCAACCTCAACGATGGCTGCGGAAGAAATTAAAGAGCTATG
TGATGCCAACCATATTGAGCTCGACTTAGTGCAATGCCGGGTCACCGAAATCGAAACCTATATGGACGGCGCCGATCTTA
TCTGTACCACTGCCAGGGTCGATCGCGCCTTTGGCGATATTCCCGTCGTTCACGGTATGCCTTTTGTTTCCGGCGTGGGT
ATTGAAGCATTACAGCAAAAAATTCTGTCCATTCTCATGGGGTAA

Upstream 100 bases:

>100_bases
CCCGGATGCCGAACTGGCGTCGTGCTTTGAGCACAAAGTCCTTACGGCTGAGCAGTGCGTCCAGGTTTAATAATAAATTG
ATAATAATGAGGAATACCCT

Downstream 100 bases:

>100_bases
CGTATGTTTAGCGAAATAATGCGTTATATCCTCGACTTAGGCCCAACGGTGATGTTGCCTCTGGTGATCATCGTGTTCTC
TAAACTGCTGGGAATGAAGC

Product: PTS system galactitol-specific transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Gat; PTS system galactitol-specific EIIB component [H]

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKRKVIVACGGAVATSTMAAEEIKELCDANHIELDLVQCRVTEIETYMDGADLICTTARVDRAFGDIPVVHGMPFVSGVG
IEALQQKILSILMG

Sequences:

>Translated_94_residues
MKRKVIVACGGAVATSTMAAEEIKELCDANHIELDLVQCRVTEIETYMDGADLICTTARVDRAFGDIPVVHGMPFVSGVG
IEALQQKILSILMG
>Mature_94_residues
MKRKVIVACGGAVATSTMAAEEIKELCDANHIELDLVQCRVTEIETYMDGADLICTTARVDRAFGDIPVVHGMPFVSGVG
IEALQQKILSILMG

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3414

COG function: function code G; Phosphotransferase system, galactitol-specific IIB component

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1788409, Length=94, Percent_Identity=78.7234042553192, Blast_Score=160, Evalue=1e-41,
Organism=Escherichia coli, GI87082416, Length=90, Percent_Identity=35.5555555555556, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013011
- InterPro:   IPR003501 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 10080; Mature: 10080

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKVIVACGGAVATSTMAAEEIKELCDANHIELDLVQCRVTEIETYMDGADLICTTARV
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCEEHHHHH
DRAFGDIPVVHGMPFVSGVGIEALQQKILSILMG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRKVIVACGGAVATSTMAAEEIKELCDANHIELDLVQCRVTEIETYMDGADLICTTARV
CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCEEHHHHH
DRAFGDIPVVHGMPFVSGVGIEALQQKILSILMG
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]