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The map label for this gene is yqjD [H]

Identifier: 29143488

GI number: 29143488

Start: 3239789

End: 3240094

Strand: Direct

Name: yqjD [H]

Synonym: t3149

Alternate gene names: 29143488

Gene position: 3239789-3240094 (Clockwise)

Preceding gene: 29143487

Following gene: 29143489

Centisome position: 67.61

GC content: 56.54

Gene sequence:

>306_bases
ATGTCGAAAGATAACACTACGGAACATCTGCGCGCTGAGTTGAAATCCCTGACCGATACGCTCGAAGAAGTGCTGAGCTC
TTCGGGCGAAAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCCGAGCGCGCGCTGAAAGAGAGCCGTTACCGCC
TGGGCGAAACGGGTGATGTGATTGCCAAACAGACTCGCGTCGCCGCCGCCCGTGCCGATGATTATGTGCGCGAAAACCCC
TGGACAGGCGTAGGCATTGGCGCCGCTGTCGGTCTGGTGTTGGGCGTACTGCTGACGCGTCGTTAA

Upstream 100 bases:

>100_bases
AACGTAAGCTGGCCGAGGCTCAGGATGAGCTAAAAAAACTTGAGGCCAGAGACTACTAAATTAACGCCGAATGTAAATAC
TCACTCACCTGGAGAAAACT

Downstream 100 bases:

>100_bases
TTATGGCGGACTCTCGACAGGCACAAGGACCAGGCAAAAGCGTACTGGGTATCGGGCAGCGGATTGTCACCATTATCGTT
GAGATGGTGGAAACCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSKDNTTEHLRAELKSLTDTLEEVLSSSGEKSKEELSKIRSKAERALKESRYRLGETGDVIAKQTRVAAARADDYVRENP
WTGVGIGAAVGLVLGVLLTRR

Sequences:

>Translated_101_residues
MSKDNTTEHLRAELKSLTDTLEEVLSSSGEKSKEELSKIRSKAERALKESRYRLGETGDVIAKQTRVAAARADDYVRENP
WTGVGIGAAVGLVLGVLLTRR
>Mature_100_residues
SKDNTTEHLRAELKSLTDTLEEVLSSSGEKSKEELSKIRSKAERALKESRYRLGETGDVIAKQTRVAAARADDYVRENPW
TGVGIGAAVGLVLGVLLTRR

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and ygaM [H]

Homologues:

Organism=Escherichia coli, GI1789485, Length=101, Percent_Identity=90.0990099009901, Blast_Score=184, Evalue=7e-49,
Organism=Escherichia coli, GI1789027, Length=99, Percent_Identity=41.4141414141414, Blast_Score=73, Evalue=4e-15,
Organism=Escherichia coli, GI1788601, Length=72, Percent_Identity=38.8888888888889, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010279 [H]

Pfam domain/function: PF05957 DUF883 [H]

EC number: NA

Molecular weight: Translated: 11086; Mature: 10954

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDNTTEHLRAELKSLTDTLEEVLSSSGEKSKEELSKIRSKAERALKESRYRLGETGDV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAKQTRVAAARADDYVRENPWTGVGIGAAVGLVLGVLLTRR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKDNTTEHLRAELKSLTDTLEEVLSSSGEKSKEELSKIRSKAERALKESRYRLGETGDV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAKQTRVAAARADDYVRENPWTGVGIGAAVGLVLGVLLTRR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]