| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ygjP [H]
Identifier: 29143480
GI number: 29143480
Start: 3232573
End: 3233070
Strand: Direct
Name: ygjP [H]
Synonym: t3141
Alternate gene names: 29143480
Gene position: 3232573-3233070 (Clockwise)
Preceding gene: 161486784
Following gene: 29143481
Centisome position: 67.46
GC content: 53.82
Gene sequence:
>498_bases ATGACCTCACTAACTTACCTTCAGGGGTATCCGGAACATCTCCTTGCCCAGGTGCGCGCCTTAATCGCCGAGCAGCGCCT GGGGGCGGTGCTGGAAAAACGTTATCCCGGCGCGCATGATTACGCTACTGACAAAGCGCTATATCACTATACTCAGGAAC TGAAAAGTCAGTTTCTGCGCAATGCGCCGCCCATCAATAAAGTGATGTATGACAGCAAGATCCATGTGCTGAAAAATGCG CTGGGACTGCATACCGCTGTCTCGCGCGTTCAGGGCGGCAAGCTCAAGGCCAAGGCGGAGATCCGCGTCGCCACCGTGTT TCGCAACGCCCCGGAGCCATTCTTACGAATGATTGTGGTTCACGAACTGGCGCACCTGAAAGAGAAAGATCATAACAAAG CGTTTTATCAGCTCTGCTGCCATATGGAGCCGCAGTACCATCAACTGGAATTTGATACGCGCCTGTGGCTGACGCATCAG GCGCTGTCGGCACAATAA
Upstream 100 bases:
>100_bases GTCTACGTGGCTCATTAGGCCTCCTGAATGGTAAAATTGCGGCGTTATCCCTGAAAAGGGTGCGTGAGTATACACTTTTT ATCGGCAACATGGAGCTTTG
Downstream 100 bases:
>100_bases ATTCTGAAAATGCCCCTTCCCCCGTATCTTTTTAACGGCGTGGGCATAAAATCGACGCGTTCACATTTCGCTCATTGCCT GCCGCCACCTCAAGGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTSLTYLQGYPEHLLAQVRALIAEQRLGAVLEKRYPGAHDYATDKALYHYTQELKSQFLRNAPPINKVMYDSKIHVLKNA LGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVVHELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHQ ALSAQ
Sequences:
>Translated_165_residues MTSLTYLQGYPEHLLAQVRALIAEQRLGAVLEKRYPGAHDYATDKALYHYTQELKSQFLRNAPPINKVMYDSKIHVLKNA LGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVVHELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHQ ALSAQ >Mature_164_residues TSLTYLQGYPEHLLAQVRALIAEQRLGAVLEKRYPGAHDYATDKALYHYTQELKSQFLRNAPPINKVMYDSKIHVLKNAL GLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVVHELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHQA LSAQ
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=163, Percent_Identity=87.7300613496933, Blast_Score=305, Evalue=8e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 19031; Mature: 18900
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLTYLQGYPEHLLAQVRALIAEQRLGAVLEKRYPGAHDYATDKALYHYTQELKSQFLR CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH NAPPINKVMYDSKIHVLKNALGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHH HELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHQALSAQ HHHHHHHHCCCCHHHHHHHHCCCCCHHEECCCHHHHHHHHHHCCC >Mature Secondary Structure TSLTYLQGYPEHLLAQVRALIAEQRLGAVLEKRYPGAHDYATDKALYHYTQELKSQFLR CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH NAPPINKVMYDSKIHVLKNALGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHH HELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHQALSAQ HHHHHHHHCCCCHHHHHHHHCCCCCHHEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]