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The map label for this gene is air [H]

Identifier: 29143477

GI number: 29143477

Start: 3225753

End: 3227273

Strand: Reverse

Name: air [H]

Synonym: t3137

Alternate gene names: 29143477

Gene position: 3227273-3225753 (Counterclockwise)

Preceding gene: 29143479

Following gene: 29143476

Centisome position: 67.35

GC content: 55.75

Gene sequence:

>1521_bases
ATGTCTTCTCATCCCTACGTCAGCCAGCTAAATACCCCGCTGGATGATGATACCACTCTGATGTCTACGACCGACCTGGA
AAGCTATATCACTCACGCCAATGACACTTTTGTCCAGGTGAGCGGCTATCAGTTAAACGAGTTACTGGCGCGGCCACATA
ATCTGGTGCGTCATCCGGATATGCCGAAAGCTGCCTTCGCAGATATGTGGTACACCCTAAAACAGGGCGAACCGTGGAGC
GGCATTGTGAAAAACCGGCGTAAAAACGGCGATCATTATTGGGTGCGGGCCAACGCGGTACCGATGATACGTGAAGGGCG
TGTGACGGGATATATGTCGATCCGTACCCGCGCCACGGATGATGAGATTGCCGCCGTCGAGCCTTTATATCAGGCGCTAA
ATGAAGGGCGGTGTAGTAAACGTATTCATAAAGGCCTGGTGGTTCGTCAGGGCTTGCTGGGCAAACTGCCCGCGATGCCT
GTTCGCTGGCGAGTGCGTAGCATTATGGGGCTAATGGCCGTAATGCTGGCGTTGGCGCTGTTCGGTACGGATGCCTCATG
GCAGGCGTTGTTGTTGGGCGCGTTGGCGATGCTGGCAGGTACGGCGCTATTTGAATGGCAAATTGTGCGTCCCATTGAAA
ATGTGGCGACGCAGGCGCTGAAAGTGGCGACCGGCGAACGCAACAGCGTACAACACCTTAATCGTAGCGATGAGTTGGGG
CTGACGCTGAGGGCCGTGGGGCAGCTTGGCTTGATGTGCCGTTGGCTGATCAATGACGTATCAAGTCAGGTGTCCAGCGT
CAGAAACGGCAGTGAAAGGCTGGCGAAGGGTAACAATGATCTGAACGAACACACCCGTCAGACCGTGGAGAATGTTCAGG
AAACGGTAACGACCATGAACCAGATGGCGGAGTCCGTGAAGCTCAATTCCGAGACGGCTTCCGCTGCGGATAAGCTTTCC
ATGGCGGCCAGTAGCGCGGCGACTCAGGGAGGTGAGGCGATGGATACGGTGATTAAAACGATGGATGATATCGCTCACAG
TACGCAACGTATCGGGACGATCACCACGCTAATTAACGATATCGCTTTTCAGACGAATATCCTGGCGCTGAATGCGGCGG
TAGAAGCGGCGAGAGCGGGCGAGCAGGGGAAAGGGTTTGCCGTGGTTGCTGGCGAGGTACGCCATCTTGCCAGCCGCAGC
GCTAACGCGGCGAACGATATTCGTAAATTAATTGATGCCAGCGCAACAAAGGTGCAGTCAGGCTCCGAGCAGGTTCACGC
CGCAGGCCGTACCATGGATGACATTGTAGCCCAGGTGCAAAATGTCACCCTGCTTATCGCACGGATCAGCCAGTCGACGC
AGGAACAGACAGATGGGCTTTCCAGCCTGACTCGCGCCGTGGACGAGTTGAACCGCATAACCCAGAAGAATGCGGCGCTG
GTGGAAGAGAGCGCACAAGTCTCCGCGATGGTAAAACACCGTGCCAGCCGGCTGGAGGATGCGGTCACGGTACTGCATTA
A

Upstream 100 bases:

>100_bases
CGATCCAGAGCAATTTTAACAACTAAAGATAAATAGATTAGCGCCGAAATAACATCTGAGCGAAAAATTAACATCCAGAT
AACCTGCACAGGACGCTATC

Downstream 100 bases:

>100_bases
GTTTATTTGTAGGTAGCAACGGTAATGACATCCGCCCGGTAGCAACAAGCTTACCGGGCGGATGTGCTCTGATAGAAGGC
GGTGCCTGCCATCATAGAGA

Product: aerotaxis receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSSHPYVSQLNTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQLNELLARPHNLVRHPDMPKAAFADMWYTLKQGEPWS
GIVKNRRKNGDHYWVRANAVPMIREGRVTGYMSIRTRATDDEIAAVEPLYQALNEGRCSKRIHKGLVVRQGLLGKLPAMP
VRWRVRSIMGLMAVMLALALFGTDASWQALLLGALAMLAGTALFEWQIVRPIENVATQALKVATGERNSVQHLNRSDELG
LTLRAVGQLGLMCRWLINDVSSQVSSVRNGSERLAKGNNDLNEHTRQTVENVQETVTTMNQMAESVKLNSETASAADKLS
MAASSAATQGGEAMDTVIKTMDDIAHSTQRIGTITTLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRS
ANAANDIRKLIDASATKVQSGSEQVHAAGRTMDDIVAQVQNVTLLIARISQSTQEQTDGLSSLTRAVDELNRITQKNAAL
VEESAQVSAMVKHRASRLEDAVTVLH

Sequences:

>Translated_506_residues
MSSHPYVSQLNTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQLNELLARPHNLVRHPDMPKAAFADMWYTLKQGEPWS
GIVKNRRKNGDHYWVRANAVPMIREGRVTGYMSIRTRATDDEIAAVEPLYQALNEGRCSKRIHKGLVVRQGLLGKLPAMP
VRWRVRSIMGLMAVMLALALFGTDASWQALLLGALAMLAGTALFEWQIVRPIENVATQALKVATGERNSVQHLNRSDELG
LTLRAVGQLGLMCRWLINDVSSQVSSVRNGSERLAKGNNDLNEHTRQTVENVQETVTTMNQMAESVKLNSETASAADKLS
MAASSAATQGGEAMDTVIKTMDDIAHSTQRIGTITTLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRS
ANAANDIRKLIDASATKVQSGSEQVHAAGRTMDDIVAQVQNVTLLIARISQSTQEQTDGLSSLTRAVDELNRITQKNAAL
VEESAQVSAMVKHRASRLEDAVTVLH
>Mature_505_residues
SSHPYVSQLNTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQLNELLARPHNLVRHPDMPKAAFADMWYTLKQGEPWSG
IVKNRRKNGDHYWVRANAVPMIREGRVTGYMSIRTRATDDEIAAVEPLYQALNEGRCSKRIHKGLVVRQGLLGKLPAMPV
RWRVRSIMGLMAVMLALALFGTDASWQALLLGALAMLAGTALFEWQIVRPIENVATQALKVATGERNSVQHLNRSDELGL
TLRAVGQLGLMCRWLINDVSSQVSSVRNGSERLAKGNNDLNEHTRQTVENVQETVTTMNQMAESVKLNSETASAADKLSM
AASSAATQGGEAMDTVIKTMDDIAHSTQRIGTITTLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSA
NAANDIRKLIDASATKVQSGSEQVHAAGRTMDDIVAQVQNVTLLIARISQSTQEQTDGLSSLTRAVDELNRITQKNAALV
EESAQVSAMVKHRASRLEDAVTVLH

Specific function: Signal transducer for aerotaxis. The aerotactic response is the accumulation of cells around air bubbles. The nature of the sensory stimulus detected by this protein is the proton motive force or cellular redox state. It uses a FAD prosthetic group as a r

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=506, Percent_Identity=83.7944664031621, Blast_Score=868, Evalue=0.0,
Organism=Escherichia coli, GI1787690, Length=298, Percent_Identity=39.9328859060403, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI2367378, Length=345, Percent_Identity=42.8985507246377, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI1788195, Length=298, Percent_Identity=41.2751677852349, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1788194, Length=249, Percent_Identity=45.3815261044177, Blast_Score=199, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 55140; Mature: 55009

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHPYVSQLNTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQLNELLARPHNLVRHPD
CCCCCCHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHCCCC
MPKAAFADMWYTLKQGEPWSGIVKNRRKNGDHYWVRANAVPMIREGRVTGYMSIRTRATD
CCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEEEEEECCCC
DEIAAVEPLYQALNEGRCSKRIHKGLVVRQGLLGKLPAMPVRWRVRSIMGLMAVMLALAL
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
FGTDASWQALLLGALAMLAGTALFEWQIVRPIENVATQALKVATGERNSVQHLNRSDELG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
LTLRAVGQLGLMCRWLINDVSSQVSSVRNGSERLAKGNNDLNEHTRQTVENVQETVTTMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QMAESVKLNSETASAADKLSMAASSAATQGGEAMDTVIKTMDDIAHSTQRIGTITTLIND
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASATKVQS
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
GSEQVHAAGRTMDDIVAQVQNVTLLIARISQSTQEQTDGLSSLTRAVDELNRITQKNAAL
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEESAQVSAMVKHRASRLEDAVTVLH
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSHPYVSQLNTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQLNELLARPHNLVRHPD
CCCCCHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCEEEECCCHHHHHHHCCHHHHCCCC
MPKAAFADMWYTLKQGEPWSGIVKNRRKNGDHYWVRANAVPMIREGRVTGYMSIRTRATD
CCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEEEEEECCCC
DEIAAVEPLYQALNEGRCSKRIHKGLVVRQGLLGKLPAMPVRWRVRSIMGLMAVMLALAL
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
FGTDASWQALLLGALAMLAGTALFEWQIVRPIENVATQALKVATGERNSVQHLNRSDELG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
LTLRAVGQLGLMCRWLINDVSSQVSSVRNGSERLAKGNNDLNEHTRQTVENVQETVTTMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
QMAESVKLNSETASAADKLSMAASSAATQGGEAMDTVIKTMDDIAHSTQRIGTITTLIND
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASATKVQS
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
GSEQVHAAGRTMDDIVAQVQNVTLLIARISQSTQEQTDGLSSLTRAVDELNRITQKNAAL
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEESAQVSAMVKHRASRLEDAVTVLH
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9190831; 9380671 [H]