Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yqiK [H]
Identifier: 29143460
GI number: 29143460
Start: 3203416
End: 3205095
Strand: Direct
Name: yqiK [H]
Synonym: t3119
Alternate gene names: 29143460
Gene position: 3203416-3205095 (Clockwise)
Preceding gene: 29143459
Following gene: 29143464
Centisome position: 66.85
GC content: 53.87
Gene sequence:
>1680_bases ATGGATGATGTTTTTGGCATATTGCCATCATGGATGTTTACCGCCATCGTGGCGGTTATCGTCTTACTAATTATCGGGAT CATTTTTGCTCGCCTTTATCGCCGCGCATCTGCGGAACAGGCGTTTGTCCGTACCGGGCTTGGCGGGCAAAAAGTGGTGA TGAGCGGCGGCGCTATTGTGATGCCAATCTTTCACGAAATTATTCCGATCAATATGAATACCCTAAAACTTGAAGTCAGC CGTGCTACCGTCGACAGCCTGATCACCAAAGATCGTATGCGCGTTGACGTGGTCGTTGCTTTCTTCGTGCGTGTAAAACC CTCTGTTGAAGGTATTGCCACCTCCGCACAAACGCTTGGCCAGCGAACGCTGTCACCGGAAGATCTGCGTATGCTGGTTG AGGATAAATTCGTTGACGCCTTACGCGCTACCGCAGCCCAGATGACGATGCATGAGCTACAGGATACGCGTGAAAACTTC GTTCAGGGCGTACAAAACACCGTTGCGGAAGATTTGTCGAAAAACGGCCTGGAGCTGGAAAGCGTCTCATTAACCAACTT TAACCAAACGTCCAAAGAGCATTTCAATCCAAACAATGCCTTTGATGCCGAAGGTCTGACGAAACTGACGCAGGAAACCG AACGCCGCCGTCGTGAACGTAATGAAGTGGAACAGGATGTGGAAGTGGCGGTGCGCGAAAAGAACCGCGACGCGCTTGAA CGCAAGCTGGAAATCGAGCAACAAGAAGCCTTTATGACTCTGGAGCAGGAGCAACAGGTTAAAACCCGCACCGCCGAACA AAACGCCAAAATTGCCGCTTTTGAGGCCGAGCGCCATCGTGAAGCAGAACAGACGCGCATTCTTGCTGAGCGGCAGATCC AGGAGACGGAGATCGAACGTGAGCAAGCAGTACGGTCCAGGAAAGTTGAGGCCGAGCGTGAAGTACGTATTAAAGAGATC GAACAGCAACAGGTGACAGAAATCGCCAACCAGACGAAATCTATCGCCATTGCCGCCAAATCCGAGCAGCAATCGCAAGC GGAAGCGCGCGCCAACGACGCGCTGGCCGATGCGGTTCGCGCCCAGCAAAACGTAGAAACCACCCGCCAGACCGCCGAAG CGGATCGCGCCAAGCAGGTCGCTCTGATCGCCGCGGCGCAGGATGCGGAAACCAAAGCGGTCGAACTGACCGTTCGGGCA AAAGCAGAGAAAGAAGCGGCAGAATTGCAAGCCGCCGCCATCATCGAACTGGCGGAAGCAGCGCGTAAAAAAGGTCTGGC GGAAGCCGAAGCGCAACGGGCGCTGAATGACGCTATCAACGTACTATCTGACGAACAAACCAGCCTCAAATTTAAACTAG CGCTCTTACAATCGTTGCCTGCTGTTATTGAGAAGTCTGTTGAACCGATGAAATCCATCGACGGCATTAAGATTATTCAG GTCGATGGCCTCAATCGCGGCGCGACGGCGGGCGACGTCGCCGCTGGCGGCGCTAACGGGGGAAACCTGGCGGAACAAGC GTTATCTGCCGCGCTCACCTATCGTACCCAGGCGCCGCTGATCGATTCGCTGTTAAACGAGATTGGCATCGCCGGCGGCT CGCTAAAGGCGCTGACCACGCCGTTGGTTTCATCGGCAACGGATGAGATTAATCGCGAAGCAACGATAAAAGAGCAATAA
Upstream 100 bases:
>100_bases ATTTAAAAAAGGAGACAAGGTGCTGATTGTCTGCCGACTTTCCGCAACGCGTTATTTGGCTGAGCGTACCTTCTATGTTT AATTGAGAGGAACTTACATA
Downstream 100 bases:
>100_bases CCTCCCCGCCATATCTCCTGTCCCTGGCCATAAGGCCGGGGATTTTTTTATCTTTTTTCCACCTTGTCTGTACAAAGCGT TATGACCAGCAGGCCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MDDVFGILPSWMFTAIVAVIVLLIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVS RATVDSLITKDRMRVDVVVAFFVRVKPSVEGIATSAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENF VQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALE RKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAAFEAERHREAEQTRILAERQIQETEIEREQAVRSRKVEAEREVRIKEI EQQQVTEIANQTKSIAIAAKSEQQSQAEARANDALADAVRAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRA KAEKEAAELQAAAIIELAEAARKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQSLPAVIEKSVEPMKSIDGIKIIQ VDGLNRGATAGDVAAGGANGGNLAEQALSAALTYRTQAPLIDSLLNEIGIAGGSLKALTTPLVSSATDEINREATIKEQ
Sequences:
>Translated_559_residues MDDVFGILPSWMFTAIVAVIVLLIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVS RATVDSLITKDRMRVDVVVAFFVRVKPSVEGIATSAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENF VQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALE RKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAAFEAERHREAEQTRILAERQIQETEIEREQAVRSRKVEAEREVRIKEI EQQQVTEIANQTKSIAIAAKSEQQSQAEARANDALADAVRAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRA KAEKEAAELQAAAIIELAEAARKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQSLPAVIEKSVEPMKSIDGIKIIQ VDGLNRGATAGDVAAGGANGGNLAEQALSAALTYRTQAPLIDSLLNEIGIAGGSLKALTTPLVSSATDEINREATIKEQ >Mature_559_residues MDDVFGILPSWMFTAIVAVIVLLIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIVMPIFHEIIPINMNTLKLEVS RATVDSLITKDRMRVDVVVAFFVRVKPSVEGIATSAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENF VQGVQNTVAEDLSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALE RKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAAFEAERHREAEQTRILAERQIQETEIEREQAVRSRKVEAEREVRIKEI EQQQVTEIANQTKSIAIAAKSEQQSQAEARANDALADAVRAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRA KAEKEAAELQAAAIIELAEAARKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQSLPAVIEKSVEPMKSIDGIKIIQ VDGLNRGATAGDVAAGGANGGNLAEQALSAALTYRTQAPLIDSLLNEIGIAGGSLKALTTPLVSSATDEINREATIKEQ
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Escherichia coli, GI1789430, Length=545, Percent_Identity=93.0275229357798, Blast_Score=984, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 61453; Mature: 61453
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDVFGILPSWMFTAIVAVIVLLIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEH MPIFHEIIPINMNTLKLEVSRATVDSLITKDRMRVDVVVAFFVRVKPSVEGIATSAQTLG HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE SVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALE EEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAAFEAERHREAEQTRILAERQIQETEIER HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANDALADAVR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHH AQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAELQAAAIIELAEA HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH ARKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQSLPAVIEKSVEPMKSIDGIKIIQ HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE VDGLNRGATAGDVAAGGANGGNLAEQALSAALTYRTQAPLIDSLLNEIGIAGGSLKALTT ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH PLVSSATDEINREATIKEQ HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDDVFGILPSWMFTAIVAVIVLLIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEH MPIFHEIIPINMNTLKLEVSRATVDSLITKDRMRVDVVVAFFVRVKPSVEGIATSAQTLG HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE SVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALE EEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RKLEIEQQEAFMTLEQEQQVKTRTAEQNAKIAAFEAERHREAEQTRILAERQIQETEIER HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH EQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANDALADAVR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHH AQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAELQAAAIIELAEA HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH ARKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQSLPAVIEKSVEPMKSIDGIKIIQ HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE VDGLNRGATAGDVAAGGANGGNLAEQALSAALTYRTQAPLIDSLLNEIGIAGGSLKALTT ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH PLVSSATDEINREATIKEQ HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]