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The map label for this gene is ygiC [H]

Identifier: 29143450

GI number: 29143450

Start: 3193929

End: 3195092

Strand: Direct

Name: ygiC [H]

Synonym: t3109

Alternate gene names: 29143450

Gene position: 3193929-3195092 (Clockwise)

Preceding gene: 29143449

Following gene: 29143452

Centisome position: 66.65

GC content: 51.03

Gene sequence:

>1164_bases
ATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGCGATAAAGCGACTGAATACGGGTTTAATTTTCACACTATGTA
TGGTGAACCGTACTGGTGTGAAGACGCTTATTACAAGTTAACGCTCGCCCAGGTGGAAAAACTGGAAGACGTTACCGCCG
AGCTGCACCAGATGTGCCTCAAGGTAGTAGAACGCGTCATCGCCAGCGATGAGCTGATGACGAAGTTTCGTATTCCAAAA
CATACCTGGGGTTTTGTTCGCCAGTCCTGGCAAACGCAACAACCGTCACTCTATTCCCGCCTCGATTTGGCCTGGGACGG
CATCGGCGAGCCTAAGCTGCTCGAAAATAATGCCGACACGCCAACATCGCTGTATGAAGCGGCGTTTTTTCAGTGGATTT
GGCTGGAAGATCAGATCAACGCGGGCAATCTGCCGGAAGGCAGCGATCAGTTTAATAGCCTGCAGGAAAAGCTGATTGAA
CGCTTTGCTGAACTTCGCGAACAGTACGGTTTTCAGTTGCTGCATCTCACCTGCTGTCGCGATACGGTTGAGGATCGCGG
CACCATTCAGTATTTACAGGATTGCGCGGCCGAAGCGGAAATCGCCACCGAATTTCTCTATATCGACGATATTGGTCTGG
GGGAAAAAGGTCAATTTACGGATCTGCAGGATCAGGTCATTGCGAACCTGTTCAAGCTCTATCCGTGGGAATTTATGCTA
CGCGAGATGTTTTCCACCAAGCTGGAAGATGCCGGCGTGCGCTGGCTGGAACCGGCCTGGAAAAGCATTATCTCCAATAA
AGCGTTATTGCCGCTGTTGTGGGAGATGTTCCCGGACCATCCGAATCTGTTGCCTGCGTATTTCGCCGAAGACGAACATC
CGCCAATGGATAAATATGTCGTGAAACCGATCTTCTCCCGCGAAGGGGCGAACGTATCGATTATTGAGAACGGTAAAACG
ATCGAATCCGTGGAAGGCCCGTATGGCGAAGAGGGTATGATCGTGCAACAGTTCTATCCGCTGCCAAAATTCGGCGACAG
TTACACCCTGATTGGTAGCTGGCTGATTAACGATCAACCCGCCGGAATTGGTATCCGTGAAGATCGGGCACTGATCACCC
AGGATCTCTCCCGCTTCTATCCGCATATTTTTGTCGAAGGATAG

Upstream 100 bases:

>100_bases
CCGTTACCCGCGGCGGTTTTGGCGAATCCGTCGCCAAACAGAGCACTATGCAGCGTAGCGCTGCCGGTACTTCAACACGT
TCGATGGGCGGCTGATACGC

Downstream 100 bases:

>100_bases
ATTTTCCTGTAAGCCCGATGCGCGTAGCGCCATCGGGCAATCATTCAGCGCCTTATCCGGCCTACCCCACCTGCACCGAC
AACATACTTATACTGCCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MERVSITERPDWRDKATEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCLKVVERVIASDELMTKFRIPK
HTWGFVRQSWQTQQPSLYSRLDLAWDGIGEPKLLENNADTPTSLYEAAFFQWIWLEDQINAGNLPEGSDQFNSLQEKLIE
RFAELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCAAEAEIATEFLYIDDIGLGEKGQFTDLQDQVIANLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPDHPNLLPAYFAEDEHPPMDKYVVKPIFSREGANVSIIENGKT
IESVEGPYGEEGMIVQQFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVEG

Sequences:

>Translated_387_residues
MERVSITERPDWRDKATEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCLKVVERVIASDELMTKFRIPK
HTWGFVRQSWQTQQPSLYSRLDLAWDGIGEPKLLENNADTPTSLYEAAFFQWIWLEDQINAGNLPEGSDQFNSLQEKLIE
RFAELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCAAEAEIATEFLYIDDIGLGEKGQFTDLQDQVIANLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPDHPNLLPAYFAEDEHPPMDKYVVKPIFSREGANVSIIENGKT
IESVEGPYGEEGMIVQQFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVEG
>Mature_387_residues
MERVSITERPDWRDKATEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCLKVVERVIASDELMTKFRIPK
HTWGFVRQSWQTQQPSLYSRLDLAWDGIGEPKLLENNADTPTSLYEAAFFQWIWLEDQINAGNLPEGSDQFNSLQEKLIE
RFAELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCAAEAEIATEFLYIDDIGLGEKGQFTDLQDQVIANLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPDHPNLLPAYFAEDEHPPMDKYVVKPIFSREGANVSIIENGKT
IESVEGPYGEEGMIVQQFYPLPKFGDSYTLIGSWLINDQPAGIGIREDRALITQDLSRFYPHIFVEG

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=386, Percent_Identity=94.0414507772021, Blast_Score=765, Evalue=0.0,
Organism=Escherichia coli, GI1790629, Length=387, Percent_Identity=50.3875968992248, Blast_Score=394, Evalue=1e-111,
Organism=Escherichia coli, GI1789361, Length=391, Percent_Identity=26.5984654731458, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44981; Mature: 44981

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVSITERPDWRDKATEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCL
CCCCCCCCCCCCHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVVERVIASDELMTKFRIPKHTWGFVRQSWQTQQPSLYSRLDLAWDGIGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQINAGNLPEGSDQFNSLQEKLIERFAELREQYGFQLLHLTCCR
HHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHH
DTVEDRGTIQYLQDCAAEAEIATEFLYIDDIGLGEKGQFTDLQDQVIANLFKLYPWEFML
HHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPDHPNLLPAYFAEDEHPPMDKYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHH
VKPIFSREGANVSIIENGKTIESVEGPYGEEGMIVQQFYPLPKFGDSYTLIGSWLINDQP
HHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEEHHEECCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDLSRFYPHIFVEG
CCCCCCCCHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MERVSITERPDWRDKATEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEDVTAELHQMCL
CCCCCCCCCCCCHHHHHHCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVVERVIASDELMTKFRIPKHTWGFVRQSWQTQQPSLYSRLDLAWDGIGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQINAGNLPEGSDQFNSLQEKLIERFAELREQYGFQLLHLTCCR
HHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHH
DTVEDRGTIQYLQDCAAEAEIATEFLYIDDIGLGEKGQFTDLQDQVIANLFKLYPWEFML
HHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPDHPNLLPAYFAEDEHPPMDKYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHH
VKPIFSREGANVSIIENGKTIESVEGPYGEEGMIVQQFYPLPKFGDSYTLIGSWLINDQP
HHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEEHHEECCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDLSRFYPHIFVEG
CCCCCCCCHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]