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The map label for this gene is ygiB [H]

Identifier: 29143449

GI number: 29143449

Start: 3193252

End: 3193923

Strand: Direct

Name: ygiB [H]

Synonym: t3108

Alternate gene names: 29143449

Gene position: 3193252-3193923 (Clockwise)

Preceding gene: 161486785

Following gene: 29143450

Centisome position: 66.64

GC content: 57.89

Gene sequence:

>672_bases
ATGAAACGGACAAAATCCATCCATCACGCATCATTTCGCAAAAGCTGGAGCGCGCGGCATTTAACGCCGGTCGCCCTGGC
GGTTACGGCTGTTTTTATGCTGGCTGGCTGTGAAAAAAGCGATGAAACCGTATCGCTGTATCAAAACGCTGATGACTGTT
CAGCGGCGAATCCGGGCAAAAGCGCGGAATGTACAACCGCGTATAACAATGCGCTGAAAGAGGCCGAACGTACTGCGCCT
AAGTACGCTACACGCGAAGATTGCGTCGCTGAGTTTGGCGAAGGCCAGTGCCAGCAAGCGCCCGCACAGGCTGGCATGGC
GCCGGAAAATCAGGCGCAGGCCCAACAATCCAGCGGCAGTTTCTGGATGCCGCTTATGGCAGGTTACATGATGGGGCGTC
TGATGGGCGGCGGCGCAGGCTTTGCGCAACAGCCGCTGTTTAGCTCGAAAAACCCGGCCAGCCCTGCATACGGCAAATAT
ACCGATGCGGCAGGTAAAAACTACGGGGCGGCGCAACCGGGCCGGACAATGACCGTACCGAAAACCGCGATGGCGCCGAA
ACCTGCCACCACAACAACCGTTACCCGCGGCGGTTTTGGCGAATCCGTCGCCAAACAGAGCACTATGCAGCGTAGCGCTG
CCGGTACTTCAACACGTTCGATGGGCGGCTGA

Upstream 100 bases:

>100_bases
CTATTCCGCCGCATTCTCGCCTTTTCTCGCTTCAATTTCGACCAGTCATCCTCTATTCTGAACGCATGTTGTATTTACCA
CTGGGTCCTGGAAGACAAAT

Downstream 100 bases:

>100_bases
TACGCATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGCGATAAAGCGACTGAATACGGGTTTAATTTTCACACT
ATGTATGGTGAACCGTACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKRTKSIHHASFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAP
KYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
TDAAGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGTSTRSMGG

Sequences:

>Translated_223_residues
MKRTKSIHHASFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAP
KYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
TDAAGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGTSTRSMGG
>Mature_223_residues
MKRTKSIHHASFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAP
KYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
TDAAGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGTSTRSMGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0441 family [H]

Homologues:

Organism=Escherichia coli, GI145693179, Length=223, Percent_Identity=96.8609865470852, Blast_Score=446, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009576 [H]

Pfam domain/function: PF06693 DUF1190 [H]

EC number: NA

Molecular weight: Translated: 23387; Mature: 23387

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTKSIHHASFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGK
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
SAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGS
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCHHHCCCCCCHHHHHHHCCCC
FWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDAAGKNYGAAQPGRTMTVP
EEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
KTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGTSTRSMGG
HHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MKRTKSIHHASFRKSWSARHLTPVALAVTAVFMLAGCEKSDETVSLYQNADDCSAANPGK
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCC
SAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGS
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCHHHCCCCCCHHHHHHHCCCC
FWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDAAGKNYGAAQPGRTMTVP
EEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
KTAMAPKPATTTTVTRGGFGESVAKQSTMQRSAAGTSTRSMGG
HHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA