| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yqiA [H]
Identifier: 29143444
GI number: 29143444
Start: 3188879
End: 3189460
Strand: Reverse
Name: yqiA [H]
Synonym: t3103
Alternate gene names: 29143444
Gene position: 3189460-3188879 (Counterclockwise)
Preceding gene: 29143445
Following gene: 29143443
Centisome position: 66.56
GC content: 54.64
Gene sequence:
>582_bases ATGTCTACGCTTCTCTATTTGCACGGATTCAACAGTTCCCCTCGCTCGGCAAAAGCGTGCCAGCTAAAAAACTGGCTGGC GGAGCGTCATCCGCATGTTGAGATGATCGTCCCTCAACTGCCGCCGTATCCTGCCGATGCGGCGGAGTTGCTGGAATCTC TCGTACTTGAGCATGGCGGTGCGCCATTAGGGCTGGTAGGATCGTCGCTGGGTGGTTATTACGCCACCTGGCTGTCGCAA TGTTTTATGCTGCCGGCTGTGGTGGTGAATCCCGCCGTGCGGCCCTTTGAATTACTGACCGACTATCTCGGTCAGAACGA GAACCCCTACACCGGGCAGCAATATGTGCTAGAGTCTCGCCATATTTATGATCTTAAAGTCATGCAGATTGACCCGCTGG AAGCGCCGGACCTGATCTGGCTACTGCAACAGACGGGCGATGAAGTGCTGGATTACCGCCAGGCGGTGGCATATTACGCC TCCTGCCGTCAGACAGTGACCGAGGGGGGTAATCACGCATTCACGGGCTTCGAAGATTATTTCAACCAGATTGTCGATTT TCTTGGACTGCACAGTTGCTGA
Upstream 100 bases:
>100_bases GGCGTACGCTGGAGCTCCAGGCGAACGGCGTCCTGGAGACGGAAGTGCATCGCCTGCAGGATACCCGGTTCCGACCCGAT ACCGCTTCGGAAGGATACTG
Downstream 100 bases:
>100_bases CAATCAATTCGAATTGCTAATTAAACCATGACGCAAACTTATAACGCTGATGCCATTGAGGTACTCACTGGGCTTGAGCC GGTACGCCGCCGCCCGGGGA
Product: esterase YqiA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSTLLYLHGFNSSPRSAKACQLKNWLAERHPHVEMIVPQLPPYPADAAELLESLVLEHGGAPLGLVGSSLGGYYATWLSQ CFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA SCRQTVTEGGNHAFTGFEDYFNQIVDFLGLHSC
Sequences:
>Translated_193_residues MSTLLYLHGFNSSPRSAKACQLKNWLAERHPHVEMIVPQLPPYPADAAELLESLVLEHGGAPLGLVGSSLGGYYATWLSQ CFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA SCRQTVTEGGNHAFTGFEDYFNQIVDFLGLHSC >Mature_192_residues STLLYLHGFNSSPRSAKACQLKNWLAERHPHVEMIVPQLPPYPADAAELLESLVLEHGGAPLGLVGSSLGGYYATWLSQC FMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYAS CRQTVTEGGNHAFTGFEDYFNQIVDFLGLHSC
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=191, Percent_Identity=93.717277486911, Blast_Score=371, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 21609; Mature: 21478
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLYLHGFNSSPRSAKACQLKNWLAERHPHVEMIVPQLPPYPADAAELLESLVLEHGG CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC APLGLVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCC HIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVTEGGNHAFTGFEDY CEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FNQIVDFLGLHSC HHHHHHHHHCCCC >Mature Secondary Structure STLLYLHGFNSSPRSAKACQLKNWLAERHPHVEMIVPQLPPYPADAAELLESLVLEHGG CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC APLGLVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCC HIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVTEGGNHAFTGFEDY CEEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH FNQIVDFLGLHSC HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]