| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is uxaC [H]
Identifier: 29143402
GI number: 29143402
Start: 3140296
End: 3141708
Strand: Direct
Name: uxaC [H]
Synonym: t3058
Alternate gene names: 29143402
Gene position: 3140296-3141708 (Clockwise)
Preceding gene: 29143401
Following gene: 29143405
Centisome position: 65.53
GC content: 53.86
Gene sequence:
>1413_bases ATGGCTACGTTTATGACTGAAGATTTTCTACTTAAAAACGACATTGCCCGCACGCTGTACCATAAATACGCCGCGCCCAT GCCGATTTATGACTTCCACTGCCATTTAAGTCCGCAGGAAATCGCCGACGATCGCCGTTTCGATAACCTCGGTCAGATCT GGCTGGAAGGCGACCACTATAAATGGCGAGCGCTACGAAGCGCAGGCGTGGATGAGTCGCTGATCACCGGCAAAGAGACC AGCGATTATGAAAAATATATGGCCTGGGCCAATACCGTTCCAAAAACGCTGGGCAATCCGCTGTATCACTGGACGCACCT TGAACTACGCCGTCCATTTGGCATTACAGGTACGCTGTTCGGACCGGATACCGCGGAAAGTATCTGGACGCAGTGTAATG AGAAACTGGCGACGCCGGCCTTTTCCGCGCGCGGTATTATGCAGCAGATGAATGTGCGGATGGTCGGAACCACCGACGAC CCTATAGATTCTCTGGAATATCACCACCAGATAGCCGCCGACGACAGCATTGATATTGAAGTCGCGCCAAGCTGGCGCCC CGACAAAGTTTTCAAAATCGAACTGGACGGCTTTGTCGATTACCTGGGGAAACTGGAAGCGGCGGCAGATGTCAGCATTA CCCGTTTCGACGATTTACGTCAGGCGCTCACTCGCCGCCTCGACCATTTCGCCGCCTGCGGCTGCCGCGCGTCCGATCAT GGCATTGAAACGCTGCGATTTGCGCCGGTGCCCGACGACGCGCAGCTTGACGCCATTCTGGGCAAACGTCTGGCAGGCGA AACGTTGAGCGAACTTGAGATCGCCCAGTTTACCACGGCGGTGCTGGTCTGGCTGGGCCGTCAGTACGCCGCGCGCGGCT GGGTGATGCAGCTACATATTGGCGCGATCCGTAACAATAATACCCGTATGTTCCGCCTGCTCGGGCCGGATACCGGCTTT GACTCTATTGGCGATAATAACATTAGCTGGGCGCTCTCCCGTTTGCTCGACAGTATGGATGTGACCAATGAACTGCCCAA GACTATCCTCTATTGCCTGAACCCACGTGATAACGAAGTCCTGGCGACCATGATCGGTAACTTCCAGGGGCCGGGAATTG CCGGAAAAGTGCAGTTTGGTTCCGGCTGGTGGTTTAACGATCAGAAAGACGGGATGCTGCGCCAACTGGAGCAACTGTCG CAAATGGGACTGTTAAGTCAGTTTGTCGGGATGCTGACCGACTCCCGCAGTTTCCTTTCTTATACGCGACATGAATATTT CCGGCGTATTCTCTGTAACCTGCTGGGACAGTGGGCGCAGGACGGAGAGATTCCTGATGATGAAGCGATGTTAAGCCGTA TGGTTCAGGATATCTGCTTCAATAATGCCCAGCGTTATTTCACGATTAAATAA
Upstream 100 bases:
>100_bases ACCACGAATTTGTGCAAGCCGTTACCGACGCTTACCAACAGCTATTGCAGAATGGCGCGAAAGCCACGGTAGAAGCGCTG GCTAAGTAAGGAGATAAATC
Downstream 100 bases:
>100_bases TCGCTATTAATCTGTGAGCACAGGTTTCAGGTATTTCGAGGGGCAGGAAGGCGGTAAGAGAGTGAGAAATTTAGCAGTAA CGCACTTTTCCAGCCAAAGT
Product: glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MATFMTEDFLLKNDIARTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKET SDYEKYMAWANTVPKTLGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGTTDD PIDSLEYHHQIAADDSIDIEVAPSWRPDKVFKIELDGFVDYLGKLEAAADVSITRFDDLRQALTRRLDHFAACGCRASDH GIETLRFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGF DSIGDNNISWALSRLLDSMDVTNELPKTILYCLNPRDNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQKDGMLRQLEQLS QMGLLSQFVGMLTDSRSFLSYTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK
Sequences:
>Translated_470_residues MATFMTEDFLLKNDIARTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKET SDYEKYMAWANTVPKTLGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGTTDD PIDSLEYHHQIAADDSIDIEVAPSWRPDKVFKIELDGFVDYLGKLEAAADVSITRFDDLRQALTRRLDHFAACGCRASDH GIETLRFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGF DSIGDNNISWALSRLLDSMDVTNELPKTILYCLNPRDNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQKDGMLRQLEQLS QMGLLSQFVGMLTDSRSFLSYTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK >Mature_469_residues ATFMTEDFLLKNDIARTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETS DYEKYMAWANTVPKTLGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGTTDDP IDSLEYHHQIAADDSIDIEVAPSWRPDKVFKIELDGFVDYLGKLEAAADVSITRFDDLRQALTRRLDHFAACGCRASDHG IETLRFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGFD SIGDNNISWALSRLLDSMDVTNELPKTILYCLNPRDNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQKDGMLRQLEQLSQ MGLLSQFVGMLTDSRSFLSYTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367192, Length=470, Percent_Identity=67.0212765957447, Blast_Score=664, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003766 - InterPro: IPR023177 [H]
Pfam domain/function: PF02614 UxaC [H]
EC number: =5.3.1.12 [H]
Molecular weight: Translated: 53492; Mature: 53361
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFMTEDFLLKNDIARTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHY CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCEEECCCCH KWRALRSAGVDESLITGKETSDYEKYMAWANTVPKTLGNPLYHWTHLELRRPFGITGTLF HHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEC GPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGTTDDPIDSLEYHHQIAADDSIDIE CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCEEE VAPSWRPDKVFKIELDGFVDYLGKLEAAADVSITRFDDLRQALTRRLDHFAACGCRASDH ECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GIETLRFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHI CCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE GAIRNNNTRMFRLLGPDTGFDSIGDNNISWALSRLLDSMDVTNELPKTILYCLNPRDNEV EEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH LATMIGNFQGPGIAGKVQFGSGWWFNDQKDGMLRQLEQLSQMGLLSQFVGMLTDSRSFLS HHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure ATFMTEDFLLKNDIARTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHY CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCEEECCCCH KWRALRSAGVDESLITGKETSDYEKYMAWANTVPKTLGNPLYHWTHLELRRPFGITGTLF HHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEC GPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGTTDDPIDSLEYHHQIAADDSIDIE CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCEEE VAPSWRPDKVFKIELDGFVDYLGKLEAAADVSITRFDDLRQALTRRLDHFAACGCRASDH ECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GIETLRFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHI CCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE GAIRNNNTRMFRLLGPDTGFDSIGDNNISWALSRLLDSMDVTNELPKTILYCLNPRDNEV EEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH LATMIGNFQGPGIAGKVQFGSGWWFNDQKDGMLRQLEQLSQMGLLSQFVGMLTDSRSFLS HHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA