| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29143302
Identifier: 29143302
GI number: 29143302
Start: 3042030
End: 3042749
Strand: Reverse
Name: 29143302
Synonym: t2951
Alternate gene names: NA
Gene position: 3042749-3042030 (Counterclockwise)
Preceding gene: 29143303
Following gene: 29143301
Centisome position: 63.5
GC content: 47.64
Gene sequence:
>720_bases ATGTCTCAACAAGAAATCAGCATCATTAACCTCGACCAGCTTGTGTCCATGACCTCAGTTGAAATTGCTGAGCTGACAGG CAAGGAGCACCGAAATGTCCTTCGTGATATTCGCAATATGGTTGAGGAGCTTAACGCACTCAAAACTGAGCACTGCTCAA AACTGAGCAGTCCTATAGGGGTGATTGAAGATGTCTATCTAAATGCGCAGGGGAAACAGCAGCCTCTGTACCGTCTCGAC CGTAAGCATACTTTTATTCTGGTCGCTGGCTATTCTGTTCACCTACGCGCCAAGTGTTACGACCATATTCAGACGTTAGA ACGTCGAGTTCTTCAACTGGAAGACCAGAAGAAACGAGCAGCCATTCAGTCAGCTAATCGTCGAGGCGTGACTTGGGGCG ATTACTGCAAGGCCAATGGTCTACCCGCTCAGAAACTGATGACCATCCTTAAGAAAGAGCGCAAGCTGTTCCGAGTACAT TCAAGCAGTGGCGAGTGGTCAGTCAATCCAAACTATGTGGAGTACTTTCGAATTATCAAACCTACTGACCATCGATTCAA CCCAAACGGTATAAACATTCGGTTTAACGCTAAGGGGCTGGAGTTCTTCAGCCGACCTGAAAACGTACTCAAGATGCACA GAAAGGTCATAGCGGTTCATGGAAGCGACGCTGCTAAACAGCAACACATACAGGCAGTAGCAAAGCTGGAGGGGAGGTAA
Upstream 100 bases:
>100_bases GTTTGCATCCTGTTGTCCTGCTGGTCTCCCTTCGCTTGGGGACTTTGAGTAGGTCAGTGGGGGTGCGACTTCAGGGTGCA AACAAAAAGGAAATCAAGCT
Downstream 100 bases:
>100_bases TTCATGACTAATAACACAAATGACACAATCAAGATTGACCCAAGGACACCAGAAGGCCGTAAGGCGTTACGCCTGATGGT GGTACCCCCCAAGGCACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSQQEISIINLDQLVSMTSVEIAELTGKEHRNVLRDIRNMVEELNALKTEHCSKLSSPIGVIEDVYLNAQGKQQPLYRLD RKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKANGLPAQKLMTILKKERKLFRVH SSSGEWSVNPNYVEYFRIIKPTDHRFNPNGINIRFNAKGLEFFSRPENVLKMHRKVIAVHGSDAAKQQHIQAVAKLEGR
Sequences:
>Translated_239_residues MSQQEISIINLDQLVSMTSVEIAELTGKEHRNVLRDIRNMVEELNALKTEHCSKLSSPIGVIEDVYLNAQGKQQPLYRLD RKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKANGLPAQKLMTILKKERKLFRVH SSSGEWSVNPNYVEYFRIIKPTDHRFNPNGINIRFNAKGLEFFSRPENVLKMHRKVIAVHGSDAAKQQHIQAVAKLEGR >Mature_238_residues SQQEISIINLDQLVSMTSVEIAELTGKEHRNVLRDIRNMVEELNALKTEHCSKLSSPIGVIEDVYLNAQGKQQPLYRLDR KHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRAAIQSANRRGVTWGDYCKANGLPAQKLMTILKKERKLFRVHS SSGEWSVNPNYVEYFRIIKPTDHRFNPNGINIRFNAKGLEFFSRPENVLKMHRKVIAVHGSDAAKQQHIQAVAKLEGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27511; Mature: 27380
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQEISIINLDQLVSMTSVEIAELTGKEHRNVLRDIRNMVEELNALKTEHCSKLSSPIG CCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VIEDVYLNAQGKQQPLYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRA HHHHHEECCCCCCCHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AIQSANRRGVTWGDYCKANGLPAQKLMTILKKERKLFRVHSSSGEWSVNPNYVEYFRIIK HHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEC PTDHRFNPNGINIRFNAKGLEFFSRPENVLKMHRKVIAVHGSDAAKQQHIQAVAKLEGR CCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SQQEISIINLDQLVSMTSVEIAELTGKEHRNVLRDIRNMVEELNALKTEHCSKLSSPIG CCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VIEDVYLNAQGKQQPLYRLDRKHTFILVAGYSVHLRAKCYDHIQTLERRVLQLEDQKKRA HHHHHEECCCCCCCHHHHHCCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AIQSANRRGVTWGDYCKANGLPAQKLMTILKKERKLFRVHSSSGEWSVNPNYVEYFRIIK HHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEC PTDHRFNPNGINIRFNAKGLEFFSRPENVLKMHRKVIAVHGSDAAKQQHIQAVAKLEGR CCCCCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA