| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29143299
Identifier: 29143299
GI number: 29143299
Start: 3040062
End: 3041183
Strand: Reverse
Name: 29143299
Synonym: t2948
Alternate gene names: NA
Gene position: 3041183-3040062 (Counterclockwise)
Preceding gene: 29143300
Following gene: 29143298
Centisome position: 63.46
GC content: 49.55
Gene sequence:
>1122_bases GTGTCTATTACAAATCAAATTAACAAAGCATCCTCACTGGCTTCTCTGCGTCAGCCTCAGCGAGATAAAGACGGTCAAAT CATTAAGGGGTCTATATGGGGCACTGACATCTCACGCACTGACTATGTTCAGATGACCAATGGTCAAGACGCCCAAGTTC TCAACGTAGGCTTTACGGACCGCTCAGGCCGTCCGATGGCCTTCGGGAATGATTCACATGATTTTGTTCAGGCGCTGGAG GACTCTTTGGATGAGACCTTCAATGATGGAGACTTCCGCACTGCTGTAATGGAGAATGTCTTCCCTTGTGAGTTTCGCCC ATACGGCACTGACCCTACGCCTATTCGCCGTCAGGCTCTCCAGAATCGCACCGTCCGCTTTAAGCATAATGGCGCGTTTA ATCCAGCTAAGGATGCTCCGTCTACCACAGCCATCAAAGGGGCAAGCGTAACTGTCACCCCAGTGTTGAACCCTGAGACC AATAAGACGGGCATCCTGTGTTCTGCTGCTACTCATGTATCTGACTTCGATATGATGGGCGGTTGGACCGAGGGGGCATT AATCCAGACTGTAGGTGATATGCAGGTTCAATACAGCCGCCAGATGTTCGCCGCTGTGGTCGATGTCCTGAAAGATACGC CAGACCTTCAAATCATTGAGGCAGCCCCACTAAGTGGTAAACCGTCTGATCAAGCTGAAGATCTTCTGGATACATTAGCG TTGAATCTTCCGGTCGAGTTGGGAAATACACTGAGCGATTACGCTGTATTGGTCCCTGAGAGACTTGAGGCAATCTTGGA CCGAGCCGCTCAACGCGCAGGTCATGAGGATATTAGTGAGCTATTGGGCTGCACTGTATGCAGCTATGCGGGCGATGATA CAGGTGTCTATCTCCTGCCTAAGCGGTTCGCTTCTATCTCTTTCAGGTCAACTAAAGACGCTAAGACGGTAGATGTCAAA GTGACCCGAAATAGTAACACTGCTGGGTATGACCTTGAGTTAATCAGTGTGGTCGATGTGTTGGCTACTGGTTCCGTTAA GGTGAAAGCAGGTGAGTTTGACGTTGAGAAAGACGCCTCTTTCCCGTTGATACATGTTATTCGGTTTACTACCCCAGAGT AA
Upstream 100 bases:
>100_bases TGATAACTTTCGGTGGCGCTGCTTGGATTCTGAGATAAGACCAATGGTGTCACCAGTTACTTTTTACGTAGTGCATTCAT ACAATAAGGAGATATTCATC
Downstream 100 bases:
>100_bases CTATAAACCCTGAGTGAACATAAGGAGTACATCCATGAGCTTACAGGAGTTGTTTGAGCTCGTCCTCTGTGTCCACTTGG TCTGCCAGATGCTCTACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MSITNQINKASSLASLRQPQRDKDGQIIKGSIWGTDISRTDYVQMTNGQDAQVLNVGFTDRSGRPMAFGNDSHDFVQALE DSLDETFNDGDFRTAVMENVFPCEFRPYGTDPTPIRRQALQNRTVRFKHNGAFNPAKDAPSTTAIKGASVTVTPVLNPET NKTGILCSAATHVSDFDMMGGWTEGALIQTVGDMQVQYSRQMFAAVVDVLKDTPDLQIIEAAPLSGKPSDQAEDLLDTLA LNLPVELGNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGVYLLPKRFASISFRSTKDAKTVDVK VTRNSNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLIHVIRFTTPE
Sequences:
>Translated_373_residues MSITNQINKASSLASLRQPQRDKDGQIIKGSIWGTDISRTDYVQMTNGQDAQVLNVGFTDRSGRPMAFGNDSHDFVQALE DSLDETFNDGDFRTAVMENVFPCEFRPYGTDPTPIRRQALQNRTVRFKHNGAFNPAKDAPSTTAIKGASVTVTPVLNPET NKTGILCSAATHVSDFDMMGGWTEGALIQTVGDMQVQYSRQMFAAVVDVLKDTPDLQIIEAAPLSGKPSDQAEDLLDTLA LNLPVELGNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGVYLLPKRFASISFRSTKDAKTVDVK VTRNSNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLIHVIRFTTPE >Mature_372_residues SITNQINKASSLASLRQPQRDKDGQIIKGSIWGTDISRTDYVQMTNGQDAQVLNVGFTDRSGRPMAFGNDSHDFVQALED SLDETFNDGDFRTAVMENVFPCEFRPYGTDPTPIRRQALQNRTVRFKHNGAFNPAKDAPSTTAIKGASVTVTPVLNPETN KTGILCSAATHVSDFDMMGGWTEGALIQTVGDMQVQYSRQMFAAVVDVLKDTPDLQIIEAAPLSGKPSDQAEDLLDTLAL NLPVELGNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGVYLLPKRFASISFRSTKDAKTVDVKV TRNSNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDASFPLIHVIRFTTPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40589; Mature: 40458
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITNQINKASSLASLRQPQRDKDGQIIKGSIWGTDISRTDYVQMTNGQDAQVLNVGFTD CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCC RSGRPMAFGNDSHDFVQALEDSLDETFNDGDFRTAVMENVFPCEFRPYGTDPTPIRRQAL CCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHH QNRTVRFKHNGAFNPAKDAPSTTAIKGASVTVTPVLNPETNKTGILCSAATHVSDFDMMG HCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHCC GWTEGALIQTVGDMQVQYSRQMFAAVVDVLKDTPDLQIIEAAPLSGKPSDQAEDLLDTLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH LNLPVELGNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGVYLLP HCCCHHHCCCHHHHHEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEC KRFASISFRSTKDAKTVDVKVTRNSNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDAS HHHHEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC FPLIHVIRFTTPE CCEEEEEEECCCC >Mature Secondary Structure SITNQINKASSLASLRQPQRDKDGQIIKGSIWGTDISRTDYVQMTNGQDAQVLNVGFTD CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCC RSGRPMAFGNDSHDFVQALEDSLDETFNDGDFRTAVMENVFPCEFRPYGTDPTPIRRQAL CCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHH QNRTVRFKHNGAFNPAKDAPSTTAIKGASVTVTPVLNPETNKTGILCSAATHVSDFDMMG HCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHCC GWTEGALIQTVGDMQVQYSRQMFAAVVDVLKDTPDLQIIEAAPLSGKPSDQAEDLLDTLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH LNLPVELGNTLSDYAVLVPERLEAILDRAAQRAGHEDISELLGCTVCSYAGDDTGVYLLP HCCCHHHCCCHHHHHEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEC KRFASISFRSTKDAKTVDVKVTRNSNTAGYDLELISVVDVLATGSVKVKAGEFDVEKDAS HHHHEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC FPLIHVIRFTTPE CCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA