| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ptsP [H]
Identifier: 29143264
GI number: 29143264
Start: 3002049
End: 3004295
Strand: Reverse
Name: ptsP [H]
Synonym: t2912
Alternate gene names: 29143264
Gene position: 3004295-3002049 (Counterclockwise)
Preceding gene: 29143265
Following gene: 29143263
Centisome position: 62.69
GC content: 56.92
Gene sequence:
>2247_bases ATGCTCACTCGCCTGCGCGAAATAGTCGAAAAAGTGGCCAGTGCGCCGCGTCTGAACGAGGCGCTGAATATTCTGGTCAC GGATATCTGTCTTGCGATGGATACAGAGGTTTGCTCGGTTTACCTGGCCGATCATGACCGACGCTGTTATTACCTGATGG CGACGCGGGGGTTGAAAAAACCGCGTGGTCGAACCGTTGCGCTTGCGTTTGATGAGGGGATCGTCGGTCTGGTGGGCAGG CTGGCGGAACCCATTAACCTTGCCGATGCGCAAAAACATCCCAGCTTTAAATACATTCCTTCGGTAAAAGAGGAGCGTTT TCGCGCGTTTCTCGGTGTGCCGATCATTCAGCGTCGCCAACTTCTCGGCGTGCTGGTCGTGCAGCAGCGCGAATTGCGCC AGTACGATGAAAGCGAAGAGTCTTTCCTCGTCACGCTCGCTACGCAGATGGCGGCTATCCTGTCACAGTCGCAGGTCACA GCGCTATTCGGGCAATACCGGCAGACGCGAATTCGCGCGCTTCCTGCGGCGCCGGGCGTGGCTATCGCAACGGGCTGGCA AGACGCGACCATGCCGCTGATGGAACAGGTTTACGAAGCGTCTACGCTGGATACCTCTCTTGAACGCGAACGATTGACCG GCGCGCTGGAAGAGGCGGCGAACGAATTCCGACGATACAGCAAACGCTTTGCCGCCGGCGCACAAAAAGAGACGGCAGCC ATTTTCGATCTGTACTCACACCTGCTTTCAGACGCCAGACTGCGTCGCGAACTCTTCGCCGAGGTCGACAAAGGCGCTGT TGCGGAGTGGGCCGTTAAAAAAATCATCGAAAAATTTGCCGAGCAATTTGCGGCGCTAACCGATAACTACCTCAAAGAAC GTGCGGGAGACTTACGCACGCTGGGGCAGCGGCTGTTATTCCATCTTGATGATTCAGTTCAGGGGCCAAACGCCTGGCCG GAACGTTTTATTCTGGTCGCGGATGAGCTGTCGGCGACCACCCTGGCGGAGCTGCCGCAGGACAGGCTGGCGGGCGTTGT GGTGCGCGACGGCGCGGCAAACTCGCATGCGGCGATTATGGTGCGCGCGCTCGGTATCCCCACCGTCATGGGCGCGGATA TCCAGCCTTCGGTGCTACATCGCCGTACGTTGGTGGTGGATGGCTATCGCGGTGAATTACTGGTCGATCCTGAACCCGTG CTTATTCAGGAATATCAGCGGCTCATTAGTGAAGAGATAGAACTCAGTCGTCTGGCGGAGGACGACGTCAATCTTCCCGC CCAACTGAAAAGCGGCGAGCGTATCAAAGTGATGCTGAATGCCGGGCTCAGCCCCGAGCATGAGGAAAAGTTAGGCAGTC GGATCGACGGTATCGGCCTGTACCGTACTGAAATTCCCTTCATGCTGCAAAGCGGGTTTCCCTCGGAAGAAGAGCAGGTG GCGCAGTATCAAGGGATGCTGCAAATGTTTAACGATAAACCGGTGACGCTGCGGACCCTGGATGTGGGAGCGGATAAGCA ACTGCCCTATATGCCGATCAGCGAGGAGAACCCGTGTCTGGGCTGGCGCGGGATCCGCATTACGCTGGATCAGCCGGAGA TCTTTTTGATCCAGGTCCGCGCGATGCTGCGTGCCAATGCGGCGACTGGCAACCTCAGCATTTTGTTGCCGATGGTCACC AGTATTGATGAAGTCGATGAAGCGCGGCGTCTGATCGAACGCGCCGGGCGCGAGGTCGAGGAGATGATCGGCTATGCGAT CCCGAAACCGCGTATCGGCATTATGCTGGAAGTACCATCAATGGTATTTATGCTGCCGCATCTGGCTAACCGGATCGACT TTATCTCGGTCGGCACCAACGATTTAACGCAATATATCCTGGCGGTAGATCGCAACAATACCCGCGTGGCCAGTATTTAT GACAGTTTGCATCCGGCTATGCTGCGCGCACTGTCCATGATCGCGCAGGAAGCCGAAAAACATGGTCTCGATCTTCGCTT GTGCGGCGAGATGGCGGGCGATCCGATGTGCGTGGCGATTCTTATCGGTCTGGGATATCGCCATCTTTCGATGAATGGCC GTTCGGTAGCGCGTGTGAAATATCTGCTGCGGCATATCGATTTTGAAGACGCGCAAACCCTTGCCAGACGCAGCCTTGAG GCGCAGATGGCGACCGAAGTGCGTCATCAGGTGGCGGCGTTTATGGAGCGCCGCGGGATGGGGGGATTGATTCGCGGAGG GTTGTAA
Upstream 100 bases:
>100_bases GAAAGAGTTTGCAAGTGTTGTCATGGCGCTTCAGGATAATCCCCCTAAGCTACAAAGCGCGCCTGCTTATCGACGTAAAA GAGGTTAAGCCACGCAAATT
Downstream 100 bases:
>100_bases CGACTGGAGCGGGAAAAAGTGACTGTGGATTCACGGCGCAGACAACACGCCTGCAAGATGAAAGACAATGCGTATACATA TCTTTTAACGGTAATCGGCA
Product: fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGR LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT ALFGQYRQTRIRALPAAPGVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAWP ERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPV LIQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT SIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIY DSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE AQMATEVRHQVAAFMERRGMGGLIRGGL
Sequences:
>Translated_748_residues MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGR LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT ALFGQYRQTRIRALPAAPGVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAWP ERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPV LIQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT SIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIY DSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE AQMATEVRHQVAAFMERRGMGGLIRGGL >Mature_748_residues MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVALAFDEGIVGLVGR LAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVT ALFGQYRQTRIRALPAAPGVAIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRTLGQRLLFHLDDSVQGPNAWP ERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPV LIQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLSILLPMVT SIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPSMVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIY DSLHPAMLRALSMIAQEAEKHGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE AQMATEVRHQVAAFMERRGMGGLIRGGL
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=748, Percent_Identity=95.0534759358289, Blast_Score=1459, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=579, Percent_Identity=34.0241796200345, Blast_Score=303, Evalue=3e-83, Organism=Escherichia coli, GI48994992, Length=502, Percent_Identity=33.0677290836653, Blast_Score=272, Evalue=6e-74, Organism=Escherichia coli, GI1788726, Length=523, Percent_Identity=32.3135755258126, Blast_Score=248, Evalue=1e-66, Organism=Escherichia coli, GI1787994, Length=408, Percent_Identity=25.7352941176471, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI226510935, Length=207, Percent_Identity=26.5700483091787, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 83642; Mature: 83642
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKK CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCEEEEEECCCCCC PRGRTVALAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQ CCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH LLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVTALFGQYRQTRIRALPAAPGV HHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LGQRLLFHLDDSVQGPNAWPERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIM HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHHCEEEEECCCCCCCCEEE VRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPVLIQEYQRLISEEIELSRLAE EEECCCCCEECCCCCHHHHHCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH DDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV CCCCCCHHCCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEHHCCCHHHHCCCCCHHHHH AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHH AMLRANAATGNLSILLPMVTSIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPS HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECHH MVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSLHPAMLRALSMIAQEAEK HHHHHHHHHCCCEEEECCCHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH HGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE CCCCEEEEHHHCCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AQMATEVRHQVAAFMERRGMGGLIRGGL HHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKK CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCEEEEEECCCCCC PRGRTVALAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQ CCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHH LLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQVTALFGQYRQTRIRALPAAPGV HHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AIATGWQDATMPLMEQVYEASTLDTSLERERLTGALEEAANEFRRYSKRFAAGAQKETAA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IFDLYSHLLSDARLRRELFAEVDKGAVAEWAVKKIIEKFAEQFAALTDNYLKERAGDLRT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LGQRLLFHLDDSVQGPNAWPERFILVADELSATTLAELPQDRLAGVVVRDGAANSHAAIM HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHHCEEEEECCCCCCCCEEE VRALGIPTVMGADIQPSVLHRRTLVVDGYRGELLVDPEPVLIQEYQRLISEEIELSRLAE EEECCCCCEECCCCCHHHHHCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH DDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV CCCCCCHHCCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEHHCCCHHHHCCCCCHHHHH AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHH AMLRANAATGNLSILLPMVTSIDEVDEARRLIERAGREVEEMIGYAIPKPRIGIMLEVPS HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECHH MVFMLPHLANRIDFISVGTNDLTQYILAVDRNNTRVASIYDSLHPAMLRALSMIAQEAEK HHHHHHHHHCCCEEEECCCHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH HGLDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRHIDFEDAQTLARRSLE CCCCEEEEHHHCCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AQMATEVRHQVAAFMERRGMGGLIRGGL HHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]