Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
---|---|
Accession | NC_004631 |
Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is 29143216
Identifier: 29143216
GI number: 29143216
Start: 2940621
End: 2941739
Strand: Direct
Name: 29143216
Synonym: t2862
Alternate gene names: NA
Gene position: 2940621-2941739 (Clockwise)
Preceding gene: 29143215
Following gene: 29143217
Centisome position: 61.37
GC content: 40.93
Gene sequence:
>1119_bases ATGGAAATAAAAAAAAGCATCTTGGTTAGAAAAAATATACGCTTGTCAGGAATCATCATTGACATGCTCATTTTAACCAT ACTTTTAATCAGCACGTTTGATGCTGTATCTGACTCTTCCCCGGTAAAAGCAAGCGCTATCAATATTGCACTTCAAGGAA CTCCCAACACAGATTATGAATTAAATGGCGATCTCCGCTCTAACGGAGGGATAATGCCAAAGACGCTTTATATGGTATGT TCAGGAGGAAAATTCAGTGCAAGCCAGGCTGATTGCGTTGCCGGTCAATGGGTAGATATCGAAGTTGTAATATCTGCGGA CAGTCATACGTTCATGAATTTGACAAATATGGGCAATTTGAGTTCTTCTGCATTTCAGGAAAAAAGGCGTGCTCGCTGTA CAGCGAAAAATAGTAATACGATGGATTGTATTTGGGAAAGTAACTTCGACATTAACTTGTTTTTTTCACCTTCTACAAAC ATCTCCTCAATTGAAAGACAATCTCTGACTCTCCATATCGAGCCTACGAATAATGCATCACCTTCTCTACAGCAAATCAA TATCAGCGGCGACTTAATCTACCAGCCTTCTGACTACGCAGTGTATAATCAAGGATATACTCCTGACGTCTTAGCCTACG TTAATTTTTATGCTAAATACAATATCGTCCAATCAAGCTTTGGTACACAGACAGGCCCGGCGACGGGCGCCCTGCCGGGA CGCCTCAATCTGAACGGGAACGTAGCGACCACAGTTTCTTTATATCCTGAACAACTTGATGCCTCTTTTTCGAAAACAGA ATTTTCCATCACATCTGCCAGCAAAGAATTTACGGGTTCTGGTAATAATGAACTACTGGCAGAAATCTATCTAAACTATG GACTACAGCATTGCCAGCCGCAAACGGCAGATAGTATTTGTGGTCAAATATTAGCTAACGCGAACGTTTCAACATCGTGT GGTGATCATAATATTACTATCACAACCAATATGTGCAATACAGGTAATGACCAATGTGATAGTGATGAAACATGGAAAAT TGCAGAGATCTTCGGGACATGGGGCCGGGTTAATGTCGACACTATATGCGCTATTACAGTATTGCTTCCCTATGAATAA
Upstream 100 bases:
>100_bases GAATTTAACGCCAGCGCAATGGTTAATTTTGAATACCAATAATGTTATTTAACAAAAAGGCATTGATGCTCTGGCCAGAA TAAAAAGGAGTTACAACGCA
Downstream 100 bases:
>100_bases TGCTTAGAAAAAATACTCGGAACCCTAAATAATCTCGCAAAACAGTAGATTACTTATCCGAAAAATTTTTCGGCCTTCAG TGAGGGGCTCTGCTCCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MEIKKSILVRKNIRLSGIIIDMLILTILLISTFDAVSDSSPVKASAINIALQGTPNTDYELNGDLRSNGGIMPKTLYMVC SGGKFSASQADCVAGQWVDIEVVISADSHTFMNLTNMGNLSSSAFQEKRRARCTAKNSNTMDCIWESNFDINLFFSPSTN ISSIERQSLTLHIEPTNNASPSLQQINISGDLIYQPSDYAVYNQGYTPDVLAYVNFYAKYNIVQSSFGTQTGPATGALPG RLNLNGNVATTVSLYPEQLDASFSKTEFSITSASKEFTGSGNNELLAEIYLNYGLQHCQPQTADSICGQILANANVSTSC GDHNITITTNMCNTGNDQCDSDETWKIAEIFGTWGRVNVDTICAITVLLPYE
Sequences:
>Translated_372_residues MEIKKSILVRKNIRLSGIIIDMLILTILLISTFDAVSDSSPVKASAINIALQGTPNTDYELNGDLRSNGGIMPKTLYMVC SGGKFSASQADCVAGQWVDIEVVISADSHTFMNLTNMGNLSSSAFQEKRRARCTAKNSNTMDCIWESNFDINLFFSPSTN ISSIERQSLTLHIEPTNNASPSLQQINISGDLIYQPSDYAVYNQGYTPDVLAYVNFYAKYNIVQSSFGTQTGPATGALPG RLNLNGNVATTVSLYPEQLDASFSKTEFSITSASKEFTGSGNNELLAEIYLNYGLQHCQPQTADSICGQILANANVSTSC GDHNITITTNMCNTGNDQCDSDETWKIAEIFGTWGRVNVDTICAITVLLPYE >Mature_372_residues MEIKKSILVRKNIRLSGIIIDMLILTILLISTFDAVSDSSPVKASAINIALQGTPNTDYELNGDLRSNGGIMPKTLYMVC SGGKFSASQADCVAGQWVDIEVVISADSHTFMNLTNMGNLSSSAFQEKRRARCTAKNSNTMDCIWESNFDINLFFSPSTN ISSIERQSLTLHIEPTNNASPSLQQINISGDLIYQPSDYAVYNQGYTPDVLAYVNFYAKYNIVQSSFGTQTGPATGALPG RLNLNGNVATTVSLYPEQLDASFSKTEFSITSASKEFTGSGNNELLAEIYLNYGLQHCQPQTADSICGQILANANVSTSC GDHNITITTNMCNTGNDQCDSDETWKIAEIFGTWGRVNVDTICAITVLLPYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40450; Mature: 40450
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKKSILVRKNIRLSGIIIDMLILTILLISTFDAVSDSSPVKASAINIALQGTPNTDYE CCCCCCCCEECCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEE LNGDLRSNGGIMPKTLYMVCSGGKFSASQADCVAGQWVDIEVVISADSHTFMNLTNMGNL ECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCC SSSAFQEKRRARCTAKNSNTMDCIWESNFDINLFFSPSTNISSIERQSLTLHIEPTNNAS CHHHHHHHHHHEEECCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCC PSLQQINISGDLIYQPSDYAVYNQGYTPDVLAYVNFYAKYNIVQSSFGTQTGPATGALPG CCEEEEECCCEEEECCCCCEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC RLNLNGNVATTVSLYPEQLDASFSKTEFSITSASKEFTGSGNNELLAEIYLNYGLQHCQP EEECCCCEEEEEEECHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHCCHHHCCC QTADSICGQILANANVSTSCGDHNITITTNMCNTGNDQCDSDETWKIAEIFGTWGRVNVD CCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEHHHCCCCCCCCC TICAITVLLPYE EEEEEEEEECCC >Mature Secondary Structure MEIKKSILVRKNIRLSGIIIDMLILTILLISTFDAVSDSSPVKASAINIALQGTPNTDYE CCCCCCCCEECCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEE LNGDLRSNGGIMPKTLYMVCSGGKFSASQADCVAGQWVDIEVVISADSHTFMNLTNMGNL ECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCC SSSAFQEKRRARCTAKNSNTMDCIWESNFDINLFFSPSTNISSIERQSLTLHIEPTNNAS CHHHHHHHHHHEEECCCCCCEEEEEECCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCC PSLQQINISGDLIYQPSDYAVYNQGYTPDVLAYVNFYAKYNIVQSSFGTQTGPATGALPG CCEEEEECCCEEEECCCCCEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC RLNLNGNVATTVSLYPEQLDASFSKTEFSITSASKEFTGSGNNELLAEIYLNYGLQHCQP EEECCCCEEEEEEECHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHCCHHHCCC QTADSICGQILANANVSTSCGDHNITITTNMCNTGNDQCDSDETWKIAEIFGTWGRVNVD CCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEHHHCCCCCCCCC TICAITVLLPYE EEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA