Click here to switch to the map view.

The map label for this gene is steF [H]

Identifier: 29143215

GI number: 29143215

Start: 2940026

End: 2940562

Strand: Direct

Name: steF [H]

Synonym: t2861

Alternate gene names: 29143215

Gene position: 2940026-2940562 (Clockwise)

Preceding gene: 29143214

Following gene: 29143216

Centisome position: 61.35

GC content: 48.23

Gene sequence:

>537_bases
ATGAACCGTATTTTTCAAACTACCGGGCATTTGATCGGAGGCGTAATGTTATGGGCGGTTTGCAATACGCTACCTGCTGC
CACGCCTAATGTGCACTACAGCGGTAAGCTGGTTGCCGGAGCCTGTAACCTGGTAGTGGATAATGACACGATGGCGACGG
TGGATTTTCATACTATTGGCAGTGACAATTTCGACGCCAGCGGGCAAACGACTCCTGTTCCATTCACACTTAGCCTCCAG
GATTGCAAAACAGCGCTAGCCAACGGCGTGGTGGTGACCTTTCAGGGTGTTGAAGACAGTACCCTGCCCGGACTGCTGGC
GCTCGAATCGTCTTCTATTGCTAACGGTTTTGCTATAGGGATTGAGACCGCAGATCAGCACCCGTTAATTATCAACGCTT
CTCAAGGTACGGAATTTATGTTGGCAGAGGGAAATACCATTATCAATCTCCAGGCATGGCTACAAAAAACATCAGGGGAA
AATATTATGCCTGGGGAATTTAACGCCAGCGCAATGGTTAATTTTGAATACCAATAA

Upstream 100 bases:

>100_bases
CATCGCTTCCCACACTAAAAGCCGTGCCGGTAAAACAGCCCGGTAAAGAGCCTGCCGAAGGCGATTTTGAAGCTTTTGCC
ACGTTACAGGTGGATTACCA

Downstream 100 bases:

>100_bases
TGTTATTTAACAAAAAGGCATTGATGCTCTGGCCAGAATAAAAAGGAGTTACAACGCAATGGAAATAAAAAAAAGCATCT
TGGTTAGAAAAAATATACGC

Product: fimbrial subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQ
DCKTALANGVVVTFQGVEDSTLPGLLALESSSIANGFAIGIETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGE
NIMPGEFNASAMVNFEYQ

Sequences:

>Translated_178_residues
MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQ
DCKTALANGVVVTFQGVEDSTLPGLLALESSSIANGFAIGIETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGE
NIMPGEFNASAMVNFEYQ
>Mature_178_residues
MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQ
DCKTALANGVVVTFQGVEDSTLPGLLALESSSIANGFAIGIETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGE
NIMPGEFNASAMVNFEYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1788674, Length=178, Percent_Identity=42.1348314606742, Blast_Score=143, Evalue=5e-36,
Organism=Escherichia coli, GI87082421, Length=158, Percent_Identity=29.746835443038, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1787781, Length=154, Percent_Identity=32.4675324675325, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18824; Mature: 18824

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEEEEEECCCEEEEEEEEECC
SDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTLPGLLALESSSIANGFAIG
CCCCCCCCCCCCCEEEEEHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEE
IETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGENIMPGEFNASAMVNFEYQ
EECCCCCCEEEECCCCCEEEEECCCEEEEEHHHEECCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEEEEEEEEECCCEEEEEEEEECC
SDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTLPGLLALESSSIANGFAIG
CCCCCCCCCCCCCEEEEEHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEE
IETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGENIMPGEFNASAMVNFEYQ
EECCCCCCEEEECCCCCEEEEECCCEEEEEHHHEECCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]