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The map label for this gene is spaN [H]

Identifier: 29143153

GI number: 29143153

Start: 2873103

End: 2874113

Strand: Reverse

Name: spaN [H]

Synonym: t2794

Alternate gene names: 29143153

Gene position: 2874113-2873103 (Counterclockwise)

Preceding gene: 29143154

Following gene: 29143152

Centisome position: 59.98

GC content: 48.57

Gene sequence:

>1011_bases
ATGGGCGATGTGTCAGCTGTCAGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGC
ATTAAAAAAAACGGTGGAAAAACATAAGACAGAATATTCCGGTGATAAAAAAGATCGCGACTATGGCGATGCTTTCGTAA
TGCATAAAGAAACGGCTTTACCGGTATTACTGGCGGCATGGCGACATTGCGCGCCAGCGAAATCAGAACATCACAATGGC
AACGTTTCTGGTCTGCATCATAACGGAAAAGGCGAACTCAGGATTGCTGAAAAACTGTTGAAAGTCACTGCTGAAAAATC
TGTCGGTTTGATTTCTGCGGAGGCCAAAGTAGATAAATCCGCAGCGTTGCTATCGCCTAAAAATAGGCCGTTAGAAAGCG
TAAGCGGTAAAAAATTATCTGCTGATTTAAAAGCCGTGGAATCCGTTAGTGAAGTAACCGATAATGCCACGGGAATCTCT
GACGATAATATCAAGGCATTGCCTGGGGATAATAAAGCCATCGCGGGCGAAGGCGTTCGTAAAGAGGGCGCGCCGCTGGC
GCGGGATGTCGCACCTGCCCGAATGGCCGCAGCCAATACCGGTAAGCCTGACGATAAAGATCATAAAAAGGTTAAAGATG
TTTCTCAGCTTCCGCTGCAACCAACCACTATCGCCGATCTTAGCCAATTAACCGGCGGCGATGAAAAAATGCCTTTAGCG
GCGCAATCAAAGCCGATGATGACTATTTTTCCCACTGCCGATGGCGTGAAAGGAGAGGATAGCTCGCTGACTTACCGTTT
TCAGCGCTGGGGAAATGACTATTCCGTCAATATTCAGGCGCGGCAAGCAGGGGAGTTTTCGTTAATACCGTCAAATACGC
AGGTTGAACATCGTTTGCATGATCAATGGCAAAACGGTAATCCCCAGCGCTGGCACCTGACGCGAGACGATCAACAAAAT
CCGCAGCAGCAACAGCACAGACAGCAATCTGGCGAGGAGGATGACGCCTGA

Upstream 100 bases:

>100_bases
GCAAAGAAGGGAACTATCAACGCTGGATAATTCGTCAGAAAAGACACTATATCCAGCGAGAGATACAGCAGGAAGAGGCC
GAGTCAGAGGAGATAATTTA

Downstream 100 bases:

>100_bases
TGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCGG
GAAGCGACGCTGGAATATCC

Product: antigen presentation protein SpaN

Products: NA

Alternate protein names: Invasion protein invJ [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHCAPAKSEHHNG
NVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS
DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN
PQQQQHRQQSGEEDDA

Sequences:

>Translated_336_residues
MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHCAPAKSEHHNG
NVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS
DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN
PQQQQHRQQSGEEDDA
>Mature_335_residues
GDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHCAPAKSEHHNGN
VSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISD
DNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLAA
QSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQNP
QQQQHRQQSGEEDDA

Specific function: Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spaN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003066
- ProDom:   PD004696 [H]

Pfam domain/function: PF02510 SPAN [H]

EC number: NA

Molecular weight: Translated: 36466; Mature: 36335

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL
CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHH
PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCC
AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
HHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEECCCCCC
KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
CCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
CCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEECCCCCHHHHHHH
DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
HHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL
CCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHH
PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCC
AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
HHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEECCCCCC
KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
CCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
CCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEECCCCCHHHHHHH
DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
HHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8404849; 7752894; 11677609 [H]