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The map label for this gene is virK [H]

Identifier: 29143044

GI number: 29143044

Start: 2767292

End: 2768221

Strand: Direct

Name: virK [H]

Synonym: t2675

Alternate gene names: 29143044

Gene position: 2767292-2768221 (Clockwise)

Preceding gene: 29143042

Following gene: 29143045

Centisome position: 57.75

GC content: 44.62

Gene sequence:

>930_bases
ATGACGATGCAGCAAAGTGATATGGAAAGATATAATCCATTATTAATGTTAAAAGAAGTCATGGCGCAGACGCCTTATCG
CCATAAACGCTGGGGAGAGCGTAAGTTTCGCTATAAATTTGTATTACGTTGCCTTATTAACCCCGTAACGACAATTAAAT
ACTTCAATGAATTATGCCATCTGTCTCAGCCCAGAACGCTGATTATTCATCGTCCACTGTTGCCGGCAAAAATCCAGCGG
CCCTATTTGTATACCGGACTTAGCATACGTTGCCGGGCAAAGGCTATTCTGGAACACTACCAGTTCGTTCAGTCCTTTCC
GGAAAGTAAAATTAAAAAGATCCTTCTGTCCGAGGAACAAATCTTACTCGCTCACCTGGAAGGAAAAAACGGTGCTCTGG
TAGATATCTACTGCGGTCCCTGTGGCTATGACAGAGAAGGTGAACTGACATTAACGCTGTGCTTCAATGATACGCCGTTG
GCACGTTTATCATTTTCCTTTATCCGCCATGAAGGGAAGCAAATAGCGCTGGTTGCCGGGTTACAGGGGCCCAGTAAACA
TATCGGCCCACAAGTCATACGTAACGCCACCAAAGATTGTTACGGTCTCTTTCCTAAACGGATGCTGTATGAAGCATTTG
CGACATTGATGCAGGCCTGTAATGTCGACGAGATTTACGCGGTAAGTGAAAACAACCATGTTTATCGTCAACTCAGGTAC
TTATTCCAGAAGAAAAAAACTTTTGTGGCCAGCTATAGTGAATTCTGGGAGTCGCTAAACGGCGTTAAGAAAGGTGCCTT
ATATCATCTGCCATCACAGGTGATGCGTAAAGCGCCTGAAAGTATCCCCAGCAAAAAACGCGCAGAGTATCGGAAGCGCT
ATCATATTCTGGATACAATAATACAAGAGGTTAACAGCCTCTCCCGGTAG

Upstream 100 bases:

>100_bases
TTAACAACGTCGTCTGTACAGGCCTTCTTCGTTGCCTTTACGTTTAACTCAATCAGGCTACCGTCTCGGTTATAAGTCTA
TCGAGTAGTAGGGACGTAGT

Downstream 100 bases:

>100_bases
AACTATTTCATACGCGGATGTGCAGATCCTGCTACCGTTCAGCGGATCTCTTTGAAATCTGTATCGCTACTGGATGGTTA
AATACAGAATGGCTTGCGAG

Product: virulence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVLRCLINPVTTIKYFNELCHLSQPRTLIIHRPLLPAKIQR
PYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPL
ARLSFSFIRHEGKQIALVAGLQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTIIQEVNSLSR

Sequences:

>Translated_309_residues
MTMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVLRCLINPVTTIKYFNELCHLSQPRTLIIHRPLLPAKIQR
PYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPL
ARLSFSFIRHEGKQIALVAGLQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTIIQEVNSLSR
>Mature_308_residues
TMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVLRCLINPVTTIKYFNELCHLSQPRTLIIHRPLLPAKIQRP
YLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPLA
RLSFSFIRHEGKQIALVAGLQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRYL
FQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTIIQEVNSLSR

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=284, Percent_Identity=38.7323943661972, Blast_Score=191, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 36088; Mature: 35957

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVLRCLINPVTTIKYFNELCH
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
LSQPRTLIIHRPLLPAKIQRPYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQ
CCCCCEEEEECCCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
ILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPLARLSFSFIRHEGKQIALVAG
EEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
LQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
CCCCCHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHH
IQEVNSLSR
HHHHHHCCC
>Mature Secondary Structure 
TMQQSDMERYNPLLMLKEVMAQTPYRHKRWGERKFRYKFVLRCLINPVTTIKYFNELCH
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
LSQPRTLIIHRPLLPAKIQRPYLYTGLSIRCRAKAILEHYQFVQSFPESKIKKILLSEEQ
CCCCCEEEEECCCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
ILLAHLEGKNGALVDIYCGPCGYDREGELTLTLCFNDTPLARLSFSFIRHEGKQIALVAG
EEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEC
LQGPSKHIGPQVIRNATKDCYGLFPKRMLYEAFATLMQACNVDEIYAVSENNHVYRQLRY
CCCCCHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
LFQKKKTFVASYSEFWESLNGVKKGALYHLPSQVMRKAPESIPSKKRAEYRKRYHILDTI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHH
IQEVNSLSR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]