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The map label for this gene is yjhB [H]

Identifier: 29142893

GI number: 29142893

Start: 2586391

End: 2587644

Strand: Reverse

Name: yjhB [H]

Synonym: t2508

Alternate gene names: 29142893

Gene position: 2587644-2586391 (Counterclockwise)

Preceding gene: 29142896

Following gene: 29142892

Centisome position: 54.0

GC content: 54.07

Gene sequence:

>1254_bases
ATGTACACCCCCCTGAACTGGACGACGACACAACGACATGTGGCGTTTGCCAGCTTTACCAGTTGGATGCTGGATGCGTT
TGATTTCTTTATCCTTGTCTTTGTACTTAGCGATCTCGCCGAATGGTTTCACGCTTCCGTATCGGAGGTTTCCATTGCGA
TTATGCTGACCCTGGCGGTACGTCCCATTGGCGCGCTGCTATTTGGCCGAATGGCGGAAAAGTACGGACGTCGACCGATA
CTGATGCTCAATATTCTGTTCTTTACGGTGTTTGAACTGCTTTCCGCCTGGTCGCCCACCTTCATGGCATTTCTGATTTT
TCGGGTCATGTACGGCGTGGCGATGGGCGGGATATGGGGCGTCGCGTCATCACTGGCGATGGAAACCATTCCCGATCGTT
CGCGTGGCCTGATGTCGGGCATTTTTCAGGCAGGCTATCCCTGCGGCTATCTGTTCGCCTCGGTTATTTTTGGCCTCTTC
TACAGTATGGTAGGCTGGCGTGGCATGTTCCTGATTGGCGCCCTGCCTGTTGTCTTGCTGCCTTATATCTGGTTTAAAGT
GCCGGAATCCCCCGTCTGGCTGGCGGCCAGAGCGCGTAAAGAGAATACCGCGCTGCTTCCTGTTCTGCGCAAACAGTGGA
AGTTGTGTCTGTATCTGGTGCTGGTCATGGCGTTCTTTAACTTTTTCAGTCACGGCACGCAGGATCTCTATCCTACCTTC
CTGAAGATGCAGCATGGTTTTGATCCGCATCTGATCAGTATCATTGCAATTTTTTATAACATTGCCGCCATGCTCGGCGG
TATTTTCTACGGTACGCTATCGGAACGTATTGGGCGTAAAAAAGCGATCATGATCGCCGCCTTTCTTGCGCTTCCGGTAC
TCCCGCTATGGGCATTTTCCAGCGGATCATTCACGATTGGTCTGGGCGCGTTCCTGATGCAGTTTATGGTGCAGGGCGCC
TGGGGTGTCGTGCCGACCTGGCTGAACGAGCTGGTTCCGGCGAATGCGCGCGCCGTGCTGCCAGGGTTTGTTTACCAACT
CGGTAATTTACTGGCGTCGGTTAATGCGACGTTACAGGCCCGCATCGCGGAAACGCATGGTGGCAATTACGGGTTGGCAA
TGGCGATCGTGGCTGGCGCGGTGGCTATTTTAATCTGTGTATTTGTGGCATTTGGTCGCGAGACCCGGGGAGTCGTCATC
TCCGGTACAGATAGCGACGCCCTCCCGGAGTCGGCCATCGGTCATCGCACGTAA

Upstream 100 bases:

>100_bases
GTAGCGCAACGCTACCTTGTTACGTCGCTTTGACGACGGGAGCGCTCCAGCGTTTCGCCGCTTCAAAGCTTGATGTTATT
TTTGATGCAGGACACTACCT

Downstream 100 bases:

>100_bases
ACACTACGCTCCTGGCGCATACTGTCGCCGGGAGCGCTCCTTCCTCCTGTGGTTTTTACGCCCTTTCAACGAACAACAAA
GGTTAATGATGGCATCTGCC

Product: metabolite transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MYTPLNWTTTQRHVAFASFTSWMLDAFDFFILVFVLSDLAEWFHASVSEVSIAIMLTLAVRPIGALLFGRMAEKYGRRPI
LMLNILFFTVFELLSAWSPTFMAFLIFRVMYGVAMGGIWGVASSLAMETIPDRSRGLMSGIFQAGYPCGYLFASVIFGLF
YSMVGWRGMFLIGALPVVLLPYIWFKVPESPVWLAARARKENTALLPVLRKQWKLCLYLVLVMAFFNFFSHGTQDLYPTF
LKMQHGFDPHLISIIAIFYNIAAMLGGIFYGTLSERIGRKKAIMIAAFLALPVLPLWAFSSGSFTIGLGAFLMQFMVQGA
WGVVPTWLNELVPANARAVLPGFVYQLGNLLASVNATLQARIAETHGGNYGLAMAIVAGAVAILICVFVAFGRETRGVVI
SGTDSDALPESAIGHRT

Sequences:

>Translated_417_residues
MYTPLNWTTTQRHVAFASFTSWMLDAFDFFILVFVLSDLAEWFHASVSEVSIAIMLTLAVRPIGALLFGRMAEKYGRRPI
LMLNILFFTVFELLSAWSPTFMAFLIFRVMYGVAMGGIWGVASSLAMETIPDRSRGLMSGIFQAGYPCGYLFASVIFGLF
YSMVGWRGMFLIGALPVVLLPYIWFKVPESPVWLAARARKENTALLPVLRKQWKLCLYLVLVMAFFNFFSHGTQDLYPTF
LKMQHGFDPHLISIIAIFYNIAAMLGGIFYGTLSERIGRKKAIMIAAFLALPVLPLWAFSSGSFTIGLGAFLMQFMVQGA
WGVVPTWLNELVPANARAVLPGFVYQLGNLLASVNATLQARIAETHGGNYGLAMAIVAGAVAILICVFVAFGRETRGVVI
SGTDSDALPESAIGHRT
>Mature_417_residues
MYTPLNWTTTQRHVAFASFTSWMLDAFDFFILVFVLSDLAEWFHASVSEVSIAIMLTLAVRPIGALLFGRMAEKYGRRPI
LMLNILFFTVFELLSAWSPTFMAFLIFRVMYGVAMGGIWGVASSLAMETIPDRSRGLMSGIFQAGYPCGYLFASVIFGLF
YSMVGWRGMFLIGALPVVLLPYIWFKVPESPVWLAARARKENTALLPVLRKQWKLCLYLVLVMAFFNFFSHGTQDLYPTF
LKMQHGFDPHLISIIAIFYNIAAMLGGIFYGTLSERIGRKKAIMIAAFLALPVLPLWAFSSGSFTIGLGAFLMQFMVQGA
WGVVPTWLNELVPANARAVLPGFVYQLGNLLASVNATLQARIAETHGGNYGLAMAIVAGAVAILICVFVAFGRETRGVVI
SGTDSDALPESAIGHRT

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI23510410, Length=146, Percent_Identity=30.8219178082192, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4506999, Length=137, Percent_Identity=31.3868613138686, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI11415038, Length=215, Percent_Identity=27.4418604651163, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI296080719, Length=152, Percent_Identity=34.2105263157895, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI24497499, Length=152, Percent_Identity=34.2105263157895, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI296080721, Length=152, Percent_Identity=34.2105263157895, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI296080734, Length=152, Percent_Identity=34.2105263157895, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87082404, Length=387, Percent_Identity=28.6821705426357, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI87082231, Length=458, Percent_Identity=24.4541484716157, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1790550, Length=384, Percent_Identity=26.0416666666667, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786229, Length=446, Percent_Identity=22.8699551569507, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788292, Length=316, Percent_Identity=24.3670886075949, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081723, Length=335, Percent_Identity=22.9850746268657, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71980822, Length=290, Percent_Identity=23.448275862069, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322632, Length=422, Percent_Identity=29.3838862559242, Blast_Score=175, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24649616, Length=141, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI62484254, Length=154, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24649618, Length=141, Percent_Identity=29.0780141843972, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24649622, Length=167, Percent_Identity=28.7425149700599, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 46068; Mature: 46068

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]