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The map label for this gene is ybaE [H]

Identifier: 29142792

GI number: 29142792

Start: 2474821

End: 2476521

Strand: Direct

Name: ybaE [H]

Synonym: t2404

Alternate gene names: 29142792

Gene position: 2474821-2476521 (Clockwise)

Preceding gene: 29142789

Following gene: 29142793

Centisome position: 51.65

GC content: 56.03

Gene sequence:

>1701_bases
ATGAGGCTACTGAATCGGCTTAATCAATATCAACGCCTCTGGCAGCCTTCCGCCGGGGAAACGCAACATGTCACCGTTAG
CGAACTGGCCGAACGCTGTTTTTGTAGCGAGCGCCATCTGCGAACGCTGCTGCGTCAGGCCCAGCAGGCGGGTTGGCTAA
GATGGGAGGCGCAGTCCGGGCGCGGGAAACGTGGACGGCTCCAGTTTCTGGTCACGCCGGAATCGCTCCGCACCGCCATG
ATGGAACAGGCGCTGGAAAAAGGGCAGCAGCTCAACGTACTGGAACTGGCGCAGCTGGCGCCTGGCGAGTTACGGGCGAT
GCTCCAGCCTTTTATGGGCGGCCAATGGCAAAACGATACGCCAACATTGCGTATTCCCTACTATCGTCCGCTTGATCCGC
TGCAGCCGGGTTTCCTGCCAGGACGCGCGGAACAGCATCTCGCAGGGCAAGTTTTTTCCGGGTTAACGCGCTTCGATCGC
GATAGCCAATATCCTTGCGGGGATTTGGCGCATCACTGGAAGGTTTCCGCCGACGGTTTACGCTGGGATTTTTATATTCG
CTCCACGCTGCACTGGCATAATGGCGATGCGGTGGATACCGCGCAGTTACACGAACGCCTGGAAAGGCTGCTTACCCTAC
CGGCGCTAAGCAAATTGTTTATTAGCGTCGCACGGATCGAAGTAACGCATCCTCAGTGCCTGACCTTTCTCCTTCACCGA
CCTGATTACTGGCTGGCGCATCGTCTGGCGAGCTATTGTAGCGGTCTGGCGCATCCTGACCTGCCGCTTATCGGCACCGG
TCCTTTTCGCCTGGCGTTGTTCACGCCGGAACTGGTGCGTCTGGAAAGTCATGACCATTATCACCTCAGCCATCCGCTGC
TGAAAGCGATTGAATTCTGGATCACCCCGCAACTGTTTGCCCAGGATCTGGGCACCAGTTGCCGCCATCCGGTGCAGATT
GCCATCGGCAAACCGGAAGAGCTGGCGACGCTGAGTCAGGTAAGTAGTGGTATCAGTCTTGGCTTTTGTTATTTAACCCT
CAAAAAGGGCTCACGGCTCAACGTACAGCAGGCGCGGCGTCTGATACATATTATCCATCATACTTCGCTGCTGAAAACCT
TACCGGTAGATGAGAACTTGATTATGCCAAGTCAGGGGCTGCTACCCGGCTGGACAATCCCGCAATGGCAGGACGTTGAT
GAAACACCATTGCCGAAAAAACTTACCCTGGCGTATCACCTTCCCGTAGAGCTGCATACGATGGCGGAACAGCTTCGACA
TTACCTGGCGACGCTCGGCTGTGAGTTAACGTTGATTTTTCATAATGCCAAAAACTGGAATAACTGCCCTGCGTTGGCGC
AAGCGGATCTGATGATGGGCGACAGGCTGATCGGCGAAGCGCCGGAATATACGCTGGAGCAGTGGCTACGTTGCGATCAG
ATCTGGTCACATGTCCTGGACGCGCCTGCGTTTTCCCATCTGCAGGCTACGCTTGACGCTCTGCAAATTCAGCCCAATGA
AAAAGATCGCCGCGCCGCGCTACAACAAGTTTTTGCCAACCTGATGGATGACGCCACACTTACGCCGCTGTTTAATTATC
ACTATCGCATCAGCGCCCCACCGGGCGTTAACGGCGTTCGACTCACCCCTCGCGGCTGGTTTGAATTTAGCGAAGCCTGG
CTTCCGCCGCCTTCGCCGTGA

Upstream 100 bases:

>100_bases
TCTCTTTCTCCACACTGTAACGCGGTTAACTTGTTGTTCAGTATTACCTGAGATATACGGAAGTAATAGTGAACAGATAA
AAGGAAGTGTTCCGGGTTTT

Downstream 100 bases:

>100_bases
AGAAGCTGGTCGGGATTATCCGTACGCGTTACCATATTGGCTTTCGTCATTGATCAGGATAACTATGAAACGCGCCGTTG
TTGTATTTAGTGGAGGTCAG

Product: solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAM
MEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDR
DSQYPCGDLAHHWKVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQI
AIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVD
ETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWNNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAW
LPPPSP

Sequences:

>Translated_566_residues
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAM
MEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDR
DSQYPCGDLAHHWKVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQI
AIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVD
ETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWNNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAW
LPPPSP
>Mature_566_residues
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSGRGKRGRLQFLVTPESLRTAM
MEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDTPTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDR
DSQYPCGDLAHHWKVSADGLRWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFWITPQLFAQDLGTSCRHPVQI
AIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARRLIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVD
ETPLPKKLTLAYHLPVELHTMAEQLRHYLATLGCELTLIFHNAKNWNNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFSEAW
LPPPSP

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786650, Length=565, Percent_Identity=79.1150442477876, Blast_Score=918, Evalue=0.0,
Organism=Escherichia coli, GI1786256, Length=580, Percent_Identity=27.4137931034483, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 64612; Mature: 64612

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCC
RGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDRDSQYPCGDLAHHWKVSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCEEECCCCE
RWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
EEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFW
CCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHEECCCCCEEHHHHHHHHHHHH
ITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARR
CCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHH
LIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVDETPLPKKLTLAYHLPVELHT
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAEQLRHYLATLGCELTLIFHNAKNWNNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
HHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHH
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAP
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECC
PGVNGVRLTPRGWFEFSEAWLPPPSP
CCCCCEEECCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MRLLNRLNQYQRLWQPSAGETQHVTVSELAERCFCSERHLRTLLRQAQQAGWLRWEAQSG
CHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCC
RGKRGRLQFLVTPESLRTAMMEQALEKGQQLNVLELAQLAPGELRAMLQPFMGGQWQNDT
CCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PTLRIPYYRPLDPLQPGFLPGRAEQHLAGQVFSGLTRFDRDSQYPCGDLAHHWKVSADGL
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCEEECCCCE
RWDFYIRSTLHWHNGDAVDTAQLHERLERLLTLPALSKLFISVARIEVTHPQCLTFLLHR
EEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
PDYWLAHRLASYCSGLAHPDLPLIGTGPFRLALFTPELVRLESHDHYHLSHPLLKAIEFW
CCHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHEECCCCCEEHHHHHHHHHHHH
ITPQLFAQDLGTSCRHPVQIAIGKPEELATLSQVSSGISLGFCYLTLKKGSRLNVQQARR
CCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHH
LIHIIHHTSLLKTLPVDENLIMPSQGLLPGWTIPQWQDVDETPLPKKLTLAYHLPVELHT
HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
MAEQLRHYLATLGCELTLIFHNAKNWNNCPALAQADLMMGDRLIGEAPEYTLEQWLRCDQ
HHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHH
IWSHVLDAPAFSHLQATLDALQIQPNEKDRRAALQQVFANLMDDATLTPLFNYHYRISAP
HHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECC
PGVNGVRLTPRGWFEFSEAWLPPPSP
CCCCCEEECCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]