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The map label for this gene is rpmE2

Identifier: 29142779

GI number: 29142779

Start: 2461628

End: 2461888

Strand: Reverse

Name: rpmE2

Synonym: t2391

Alternate gene names: 29142779

Gene position: 2461888-2461628 (Counterclockwise)

Preceding gene: 29142782

Following gene: 29142778

Centisome position: 51.38

GC content: 43.3

Gene sequence:

>261_bases
ATGAAACCTGATATTCATCCTGTATACCGAACCGTCGTATTTCACGACACCAGCGCAAATGAATATGTGAAAGTGGGATC
AACTATCAAAACTGAACGTGAAATCGAACTGGACGGCGTGACATATCCGTATGTCACTATTGATGTGTCATCAAAATCGC
ATCCTTTTTATACCGGTAGACAGAAAACGTTTGATAGCGAAAGTAGCGCCGCACGCTTCCAGAAACGTTTTGGTCATTTT
ATCGGCGCTAAACGGGGGTAA

Upstream 100 bases:

>100_bases
GCTTTTGCCGCCAGGAAGAGATCGTGAATGTTTACCGGTTGAAAAAGGAGCGTTGATAGCGTATTTTATTGTTATGTTAT
AACATAATTGAGAGAGCGCA

Downstream 100 bases:

>100_bases
ATGAAATGCAGGTGTTAAACTCACTTCGCAATGCAAAACAACGGCATCCGGATTGCCAGATAGTCAAACGCAAAGGACGC
TTATACGTGATTTGTAAAAC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSSKSHPFYTGRQKTFDSESSAARFQKRFGHF
IGAKRG

Sequences:

>Translated_86_residues
MKPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSSKSHPFYTGRQKTFDSESSAARFQKRFGHF
IGAKRG
>Mature_86_residues
MKPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSSKSHPFYTGRQKTFDSESSAARFQKRFGHF
IGAKRG

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=86, Percent_Identity=74.4186046511628, Blast_Score=137, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_SALA4 (B5EXK9)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002145450.1
- ProteinModelPortal:   B5EXK9
- SMR:   B5EXK9
- PRIDE:   B5EXK9
- GeneID:   6797133
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B0510
- HOGENOM:   HBG610087
- OMA:   YRTVLFH
- ProtClustDB:   PRK01678
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9815; Mature: 9815

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSSKSHPFYTGR
CCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEECCEECCEEEEEECCCCCCEECCC
QKTFDSESSAARFQKRFGHFIGAKRG
CCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKPDIHPVYRTVVFHDTSANEYVKVGSTIKTEREIELDGVTYPYVTIDVSSKSHPFYTGR
CCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEECCEECCEEEEEECCCCCCEECCC
QKTFDSESSAARFQKRFGHFIGAKRG
CCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA