| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ybbP [H]
Identifier: 29142742
GI number: 29142742
Start: 2418341
End: 2420755
Strand: Reverse
Name: ybbP [H]
Synonym: t2352
Alternate gene names: 29142742
Gene position: 2420755-2418341 (Counterclockwise)
Preceding gene: 29142743
Following gene: 29142741
Centisome position: 50.52
GC content: 58.43
Gene sequence:
>2415_bases ATGATAGCCCGCTGGTTCTGGCGCGAATGGCGCTCGCCGTCGCTGATTATTGTCTGGCTGGCGTTGAGTCTGGCGGTGGC CTGCGTACTGGCGCTCGGCAGTATCAGCGACCGGATGGAAAAAGGGTTAAGTCAGCAAAGCCGCGAGTTTATGGCAGGCG ATCGGACGCTGCAAAGTTCGCGGGAGGTACCGAAAGCCTGGCTTGAAGAGGCGCGTAAACGCGGCCTTAACGTGGGCGAG CAGTTAACCTTTGCGACCATGACGTTTGCCGGCGATACGCCGCAACTGGCCAGCGTGAAGGCGGTAGATAGCGTTTATCC GATGTACGGCGAATTGCAAACCCGTCCAGGCGGAGTGAAACCGCAGCCGGGTAGCGTACTGCTGGCGCCGCGTCTGATGG CGCTGCTTAATTTGAAAACGGGCGATACCATTGATGTCGGCGACGTGACCTTGCGTATTGCTGGTGAAGTGGTGCAGGAG CCGGATTCCGGATTTAACCCTTTTCAGATGGCGCCGCGTCTGATGATGAATATGGCCGATGTGGCAAAAACCGGTGCGAT ACAGCCGGGGAGTCGCGTGATGTGGCGGTATAAATTCGGCGGAACGCCGCAACAGCTTGCTGGCTATGAAAGCTGGCTGT TACCGCAGCTTAAACCGGAACATCGCTGGTACGGACTGGAGCAGGATGACGGGGCATTGGGGAAATCGCTCGAACGTTCG CAGCAGTTTTTGCTGCTTTCGGCGTTATTAACGCTACTGCTGGCGGTAGCTGCCGTCGCGGTGGCGATGAGCCATTACTG CCGTAGCCGCTACGATCTGGTGGCGATTTTAAAAACGTTGGGCGCGGGCCGGGCCCAGTTGCGTAAACTTATCATCGGAC AGTGGTTGATGGTGCTGGGGCTTTCCGCCGTCACGGGAGGCGCGATTGGGTTACTGTTTGAAAACATATTGCTGGTGCTG CTAAAACCGGTATTGCCCGCCGATTTGCCGCCCGCCAGCCTGTGGCCCTGGCTGTGGGCGCTGGGCGCGATGACGGTCAT CTCTCTGCTGGTCGGTTTACGGCCTTATCGATTGTTGCTGGCGAGCCAGCCGCTACGGGTGCTGCGCCGCGATGTTGTCG CTCGCGTCTGGTCGTTAAAAATTTATTTGCCTGTCGCCTGCGCCGTCGTGGTGGCGCTGCTCGCCGGATTGATGGGCGAA AGTATGCTGTTGTGGGCGGTTCTGGCGGGCGCCGTGATACTGGCGCTGCTGTGCGGTCTGGTGGGCTGGATGCTGCTTAA CGTGTTGCGCGGCATGACGTTGACGTCGCTACCGCTGCGTCTGGCCGTCAGCCGACTTCTGCGTCAGCCGTGGTCAACGT TGAGTCAGCTTTCGGCGTTTTCGCTTTCGTTTATGCTGCTGGCGCTCTTGCTGGTGCTGCGCGGCGACCTCCTTGATCGC TGGCAACAGCAGCTCCCGCCGGAAAGCCCGAACTATTTCCTTATCAATATTGCTTCAGAACAGGTCGCGCCGCTGAAAGC CTTTTTGGCGGAACATCAGGTGATCCCGCAGACGTTTTATCCGATTGTGCGGGCGCGGTTAACGGAGATAAACGGTAATC CGACGGAAGGTCAGCAGGATGAGTCGCTCAACCGTGAACTGAATTTGACCTGGCAGGATACGCGCCCGGCGCATAATCCG CTGGTCGCCGGTCACTGGCCGCCAAAACCGGGCGAAGTCTCTATGGAAGAGGGGCTGGCGAAGCGGCTGAACGTCAAACT CGGCGATAGCGTAACCTTTATGGGCGATACCCAGGCATTTAGCGCTAAAGTCACCAGCCTGCGTCAAGTGGACTGGGAAA GCCTGCGGCCCAACTTTTTCTTCATTTTTCCTTCCGGGGCGCTGGACGGGCAACCACAAAGCTGGTTGACCAGTTTTCGC TGGGAGAATGGCAACGGCATGTTAACGCAGCTTAACCGCGAGTTTCCTACCGTCAGCCTGTTAGATATCGGGGCGATCCT GAAACAGGTGGGACAGGTGCTGGAGCAGGTCAGTCGGGCGCTGGAGGTGATGGTTGTGCTAGTCACTCTCTGCGGCATGT TGCTATTACTGGCCCAGGTACAGGTCGGGATGCGTCAGCGCCATCAGGAGCTGGTGGTGTGGCGCACGTTAGGAGCCGGA AAGAAACTGTTGCGTACCACACTCTGGTGCGAATTCGCCATGCTGGGGTTAGTTGCCGGGCTGGTCGCCGCGATTGGCGC GGAGACGGCGCTGGCGATCTTACAAATCAACGTTTTTGATTTCCCCTGGGAGCCGGACTGGCGTTTATGGGTCGCACTGC CGTTTTGCGGCGCGCTGCTGCTTTCCGTATGCGGCGGCTGGCTTGGCGTTCGTTTGCTTAAAGGCAAAGCGCTATTCCGC CAGTTTAGCGGATGA
Upstream 100 bases:
>100_bases AGCACGGCACTACGCTGATTCTGGTGACGCACGACCCGGCGCTGGCGGCGCGCTGCGACCGGCGGCTACGGTTGGTCAAC GGTCAGTTACAGGAGGAGGC
Downstream 100 bases:
>100_bases TTCATGATGTGAATAATTTCGCGCTGGTTTTTAAAACGGCGCGTACTTTTTTAGTCGCACAAATTGATAACTCCTTGATT TTTAGTAGCACAAATCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MIARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLQSSREVPKAWLEEARKRGLNVGE QLTFATMTFAGDTPQLASVKAVDSVYPMYGELQTRPGGVKPQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQE PDSGFNPFQMAPRLMMNMADVAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLKPEHRWYGLEQDDGALGKSLERS QQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAILKTLGAGRAQLRKLIIGQWLMVLGLSAVTGGAIGLLFENILLVL LKPVLPADLPPASLWPWLWALGAMTVISLLVGLRPYRLLLASQPLRVLRRDVVARVWSLKIYLPVACAVVVALLAGLMGE SMLLWAVLAGAVILALLCGLVGWMLLNVLRGMTLTSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR WQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVIPQTFYPIVRARLTEINGNPTEGQQDESLNRELNLTWQDTRPAHNP LVAGHWPPKPGEVSMEEGLAKRLNVKLGDSVTFMGDTQAFSAKVTSLRQVDWESLRPNFFFIFPSGALDGQPQSWLTSFR WENGNGMLTQLNREFPTVSLLDIGAILKQVGQVLEQVSRALEVMVVLVTLCGMLLLLAQVQVGMRQRHQELVVWRTLGAG KKLLRTTLWCEFAMLGLVAGLVAAIGAETALAILQINVFDFPWEPDWRLWVALPFCGALLLSVCGGWLGVRLLKGKALFR QFSG
Sequences:
>Translated_804_residues MIARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLQSSREVPKAWLEEARKRGLNVGE QLTFATMTFAGDTPQLASVKAVDSVYPMYGELQTRPGGVKPQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQE PDSGFNPFQMAPRLMMNMADVAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLKPEHRWYGLEQDDGALGKSLERS QQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAILKTLGAGRAQLRKLIIGQWLMVLGLSAVTGGAIGLLFENILLVL LKPVLPADLPPASLWPWLWALGAMTVISLLVGLRPYRLLLASQPLRVLRRDVVARVWSLKIYLPVACAVVVALLAGLMGE SMLLWAVLAGAVILALLCGLVGWMLLNVLRGMTLTSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR WQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVIPQTFYPIVRARLTEINGNPTEGQQDESLNRELNLTWQDTRPAHNP LVAGHWPPKPGEVSMEEGLAKRLNVKLGDSVTFMGDTQAFSAKVTSLRQVDWESLRPNFFFIFPSGALDGQPQSWLTSFR WENGNGMLTQLNREFPTVSLLDIGAILKQVGQVLEQVSRALEVMVVLVTLCGMLLLLAQVQVGMRQRHQELVVWRTLGAG KKLLRTTLWCEFAMLGLVAGLVAAIGAETALAILQINVFDFPWEPDWRLWVALPFCGALLLSVCGGWLGVRLLKGKALFR QFSG >Mature_804_residues MIARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLQSSREVPKAWLEEARKRGLNVGE QLTFATMTFAGDTPQLASVKAVDSVYPMYGELQTRPGGVKPQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQE PDSGFNPFQMAPRLMMNMADVAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLKPEHRWYGLEQDDGALGKSLERS QQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAILKTLGAGRAQLRKLIIGQWLMVLGLSAVTGGAIGLLFENILLVL LKPVLPADLPPASLWPWLWALGAMTVISLLVGLRPYRLLLASQPLRVLRRDVVARVWSLKIYLPVACAVVVALLAGLMGE SMLLWAVLAGAVILALLCGLVGWMLLNVLRGMTLTSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR WQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVIPQTFYPIVRARLTEINGNPTEGQQDESLNRELNLTWQDTRPAHNP LVAGHWPPKPGEVSMEEGLAKRLNVKLGDSVTFMGDTQAFSAKVTSLRQVDWESLRPNFFFIFPSGALDGQPQSWLTSFR WENGNGMLTQLNREFPTVSLLDIGAILKQVGQVLEQVSRALEVMVVLVTLCGMLLLLAQVQVGMRQRHQELVVWRTLGAG KKLLRTTLWCEFAMLGLVAGLVAAIGAETALAILQINVFDFPWEPDWRLWVALPFCGALLLSVCGGWLGVRLLKGKALFR QFSG
Specific function: Unknown
COG id: COG3127
COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1786704, Length=804, Percent_Identity=88.0597014925373, Blast_Score=1349, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 88863; Mature: 88863
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLQSS CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH REVPKAWLEEARKRGLNVGEQLTFATMTFAGDTPQLASVKAVDSVYPMYGELQTRPGGVK HCCHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQEPDSGFNPFQMAPRLMMNMAD CCCCCEEHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLKPEHRWYGLEQDDGALGKSLERS HHHHCCCCCCCCEEEEEECCCCHHHHHCCHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHH QQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAILKTLGAGRAQLRKLIIGQWLMVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSAVTGGAIGLLFENILLVLLKPVLPADLPPASLWPWLWALGAMTVISLLVGLRPYRLLL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH ASQPLRVLRRDVVARVWSLKIYLPVACAVVVALLAGLMGESMLLWAVLAGAVILALLCGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VGWMLLNVLRGMTLTSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVIPQTFYPIVRARLTEINGNPTEGQQD HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC ESLNRELNLTWQDTRPAHNPLVAGHWPPKPGEVSMEEGLAKRLNVKLGDSVTFMGDTQAF CCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCEECCCEEEECCCHHH SAKVTSLRQVDWESLRPNFFFIFPSGALDGQPQSWLTSFRWENGNGMLTQLNREFPTVSL HHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCHHHHHHHEEECCCCCEEECCCCCCCCHH LDIGAILKQVGQVLEQVSRALEVMVVLVTLCGMLLLLAQVQVGMRQRHQELVVWRTLGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KKLLRTTLWCEFAMLGLVAGLVAAIGAETALAILQINVFDFPWEPDWRLWVALPFCGALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEHHHHHHHHH LSVCGGWLGVRLLKGKALFRQFSG HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIARWFWREWRSPSLIIVWLALSLAVACVLALGSISDRMEKGLSQQSREFMAGDRTLQSS CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH REVPKAWLEEARKRGLNVGEQLTFATMTFAGDTPQLASVKAVDSVYPMYGELQTRPGGVK HCCHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PQPGSVLLAPRLMALLNLKTGDTIDVGDVTLRIAGEVVQEPDSGFNPFQMAPRLMMNMAD CCCCCEEHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VAKTGAIQPGSRVMWRYKFGGTPQQLAGYESWLLPQLKPEHRWYGLEQDDGALGKSLERS HHHHCCCCCCCCEEEEEECCCCHHHHHCCHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHH QQFLLLSALLTLLLAVAAVAVAMSHYCRSRYDLVAILKTLGAGRAQLRKLIIGQWLMVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LSAVTGGAIGLLFENILLVLLKPVLPADLPPASLWPWLWALGAMTVISLLVGLRPYRLLL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH ASQPLRVLRRDVVARVWSLKIYLPVACAVVVALLAGLMGESMLLWAVLAGAVILALLCGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VGWMLLNVLRGMTLTSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQQQLPPESPNYFLINIASEQVAPLKAFLAEHQVIPQTFYPIVRARLTEINGNPTEGQQD HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC ESLNRELNLTWQDTRPAHNPLVAGHWPPKPGEVSMEEGLAKRLNVKLGDSVTFMGDTQAF CCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCEECCCEEEECCCHHH SAKVTSLRQVDWESLRPNFFFIFPSGALDGQPQSWLTSFRWENGNGMLTQLNREFPTVSL HHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCHHHHHHHEEECCCCCEEECCCCCCCCHH LDIGAILKQVGQVLEQVSRALEVMVVLVTLCGMLLLLAQVQVGMRQRHQELVVWRTLGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KKLLRTTLWCEFAMLGLVAGLVAAIGAETALAILQINVFDFPWEPDWRLWVALPFCGALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEHHHHHHHHH LSVCGGWLGVRLLKGKALFRQFSG HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]