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The map label for this gene is yybO [H]

Identifier: 29142731

GI number: 29142731

Start: 2405549

End: 2406796

Strand: Reverse

Name: yybO [H]

Synonym: t2340

Alternate gene names: 29142731

Gene position: 2406796-2405549 (Counterclockwise)

Preceding gene: 29142732

Following gene: 29142730

Centisome position: 50.23

GC content: 45.99

Gene sequence:

>1248_bases
ATGAGTGAAACTAAAAAATCCGGGATTGATTACTGGAAACAAATTGTTGTCGTAATGAGTCTGGGCTGGGTAGCGATTTG
GATCTATCGCACCGTGCTTACGCCAATTTATCCAGAAATTCAGGCATCTTTAGACAATGTAAGTAATGCAGAAATAGGCG
CCATTGCAAGTTTTTACTTTTTTGCTTACTGCAGTATGCAAATCCCTTGCGGAATATTGGTCGATAAATTCGGTCAAAAA
ATCATGCTGATGGCCGGATTTACGCTTTTTATTATTGGTACACTCTGTATCGCGAAAGCCAATGGCCTGGCCATGATCTA
TACAGGGTCGCTAATGGCAGGCGGAGGATGCGCTTCTTTCTTTAGTTCGGCTTATTCACTCTCTTCGGCAAACGTGCCGC
AGGCCCGTCGGGCATTAGCCAACGCGATTATCAACAGCGGGTCGGCTATAGGGATGGGGATTGGCTTAATCGGTTCCAGC
GTATTAGTAAAAAACATGAGCATGGCCTGGCAAAATGTACTGTATATCGTGGCCGCGATATTAGTAATTATGCTGTGCGT
CTTTACGCTGGTCATTCGTGGTAAAGCCAAAAGCGACTCTGCGCAAGCGGAAAAGCAAACCCAAACCGTTACGGAAGATG
AGAAACGCGCGCCTTTATTCTCTGGTTTATTGTGTAGCGTTTACTTCCTCTATTTCTGTACCTGCTACGGTTATTATTTG
ATAGTGACCTGGCTGCCTTCTTATCTCCAGACTGAAAGAGGATTTGATGGCGGAGCTATCGGGCTGGCATCAGCTCTGGT
GGCGGTGGTTGGCGTACCGGGGGCGTTATTTTTTAGCCATCTGTCAGATAAATTCCGTAACAGTAAAGTTAAGGTTATTC
TCGGTCTGGAAATTGTGGCGGCGGCAATGTTGGCGTTTACGGTTTTGTCCCCGAATACCACGATGCTGATGGTCAGCCTG
ACGCTATACGGCTTGCTAGGGAAAATGGCAGTAGACCCGATCCTGATCTCCTTTGTATCTGAACAGGCTTCGGCAAAAAG
TCTGGGAAGAGCTTTCAGCCTTTTTAATTTCTTTGGCATGAGTTCAGCGGTTGTCGCCCCAACGTTGACCGGATTTATTT
CGGATGTAACGGGGTCGAAGGAGATCAGTTTTGTGATTTCAGCATGTTTAGTGGTTACCGGAACGCTGATCTTTGCTGCT
GTCACATTATATAAAAAGAAAGCAACGCAACGTATTGCTTCAGCTTAA

Upstream 100 bases:

>100_bases
CGCTGGAATTAATGGCCAATCATAAATTGTCCTAATTATGTGTATCGCTGCGGCTGCAGCGATACCTGTTCACAAGGAAC
ACTCTGTAAAGGTGAAGAAC

Downstream 100 bases:

>100_bases
AAATAATTATATCTACTATTTCTTTATTTTATATTTATTTGTTCCTCATAGCTAAACCCATAACAACGTTATCCGATGCG
TGAAAAGAGGGATTTATGGA

Product: metabolite transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYFFAYCSMQIPCGILVDKFGQK
IMLMAGFTLFIIGTLCIAKANGLAMIYTGSLMAGGGCASFFSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSS
VLVKNMSMAWQNVLYIVAAILVIMLCVFTLVIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYL
IVTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVAAAMLAFTVLSPNTTMLMVSL
TLYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGMSSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAA
VTLYKKKATQRIASA

Sequences:

>Translated_415_residues
MSETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYFFAYCSMQIPCGILVDKFGQK
IMLMAGFTLFIIGTLCIAKANGLAMIYTGSLMAGGGCASFFSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSS
VLVKNMSMAWQNVLYIVAAILVIMLCVFTLVIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYL
IVTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVAAAMLAFTVLSPNTTMLMVSL
TLYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGMSSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAA
VTLYKKKATQRIASA
>Mature_414_residues
SETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYFFAYCSMQIPCGILVDKFGQKI
MLMAGFTLFIIGTLCIAKANGLAMIYTGSLMAGGGCASFFSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSSV
LVKNMSMAWQNVLYIVAAILVIMLCVFTLVIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYLI
VTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVAAAMLAFTVLSPNTTMLMVSLT
LYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGMSSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAAV
TLYKKKATQRIASA

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789515, Length=424, Percent_Identity=23.5849056603774, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI2367379, Length=383, Percent_Identity=24.0208877284595, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082320, Length=381, Percent_Identity=22.5721784776903, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789152, Length=370, Percent_Identity=22.972972972973, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24584153, Length=362, Percent_Identity=25.6906077348066, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44337; Mature: 44206

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHH
FAYCSMQIPCGILVDKFGQKIMLMAGFTLFIIGTLCIAKANGLAMIYTGSLMAGGGCASF
HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEECCCHHHHH
FSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSSVLVKNMSMAWQNVLYIVAAI
HHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVIMLCVFTLVIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IVTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHH
AAMLAFTVLSPNTTMLMVSLTLYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAAVTLYKKKATQRIASA
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]