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The map label for this gene is 29142687

Identifier: 29142687

GI number: 29142687

Start: 2358256

End: 2358837

Strand: Direct

Name: 29142687

Synonym: t2288

Alternate gene names: NA

Gene position: 2358256-2358837 (Clockwise)

Preceding gene: 29142685

Following gene: 29142688

Centisome position: 49.21

GC content: 52.58

Gene sequence:

>582_bases
GTGGCTCGTCCGAAGAGTGAAGACAAAAAACAAGCATTACTGGAAGCGGCAACCCAGGCGATAGCGCAATCCGGTATCGC
CGCCTCAACGGCGGTGATTGCGCGTAACGCAGGTATTGCAGAAGGAACATTATTTCGCTATTTCGCGACCAAAGATGAGC
TGATTAACACGTTGTATTTGCATTTAAAGCAGAACCTCTGCCAGTCAATGATAATGGAGCTGGATCGATCCATTACCGAT
GCCAAAACGATGACCCGCTTTATCTGGAACAGTTATATCAGTTGGGGTCTGAACCATCCCGCGCGCCATCGGGCGATCCG
TCAACTGGCCGTCAGCGAAAAGATCACCAAAGAGACGGAACAACGGGCCGACGATATGTTCCCCGAATTGCGCGATTTAT
GTCATCGTTCCGTTTTGATGGTATTTATGTCGGATGAGTACCGCGCCTTCGGCGACGGCCTTTTTCTGGCGCTGGCTGAA
ACAACAATGGATTTCGCCGCGCGCGATCCCGCTCGCGCTGGCGAATATATTGCGCTGGGATTCGAAGCCATGTGGCGCGC
GCTGACTCGCGAGGAGCAATAA

Upstream 100 bases:

>100_bases
ATACGCCGTCAAGGTACTTTTCAAAGGTTGACATTCACCGTTGCGACGCGACAACGGGCATGATTCAATCATGTTTTTAC
AGACATAAGGGTAACGTGTA

Downstream 100 bases:

>100_bases
TGGACGGTCAAACACTGCACGCCTGTGCAAAACGCTTTGCGCTGGAACTGCCTTTTACCGAACACTGCTGGCCTTTCGGC
CCACAGTACGATGTGTTTAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator TetR; TetR Family Transcriptional Regulator Member; TetR-Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGIAEGTLFRYFATKDELINTLYLHLKQNLCQSMIMELDRSITD
AKTMTRFIWNSYISWGLNHPARHRAIRQLAVSEKITKETEQRADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAE
TTMDFAARDPARAGEYIALGFEAMWRALTREEQ

Sequences:

>Translated_193_residues
MARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGIAEGTLFRYFATKDELINTLYLHLKQNLCQSMIMELDRSITD
AKTMTRFIWNSYISWGLNHPARHRAIRQLAVSEKITKETEQRADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAE
TTMDFAARDPARAGEYIALGFEAMWRALTREEQ
>Mature_192_residues
ARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGIAEGTLFRYFATKDELINTLYLHLKQNLCQSMIMELDRSITDA
KTMTRFIWNSYISWGLNHPARHRAIRQLAVSEKITKETEQRADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAET
TMDFAARDPARAGEYIALGFEAMWRALTREEQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21900; Mature: 21769

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGIAEGTLFRYFATKDELINTLYL
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HLKQNLCQSMIMELDRSITDAKTMTRFIWNSYISWGLNHPARHRAIRQLAVSEKITKETE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAETTMDFAARDPARAGEYIALG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
FEAMWRALTREEQ
HHHHHHHHHCCCC
>Mature Secondary Structure 
ARPKSEDKKQALLEAATQAIAQSGIAASTAVIARNAGIAEGTLFRYFATKDELINTLYL
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HLKQNLCQSMIMELDRSITDAKTMTRFIWNSYISWGLNHPARHRAIRQLAVSEKITKETE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRADDMFPELRDLCHRSVLMVFMSDEYRAFGDGLFLALAETTMDFAARDPARAGEYIALG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
FEAMWRALTREEQ
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA