Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29142567
Identifier: 29142567
GI number: 29142567
Start: 2222105
End: 2222845
Strand: Reverse
Name: 29142567
Synonym: t2158
Alternate gene names: NA
Gene position: 2222845-2222105 (Counterclockwise)
Preceding gene: 29142568
Following gene: 29142566
Centisome position: 46.39
GC content: 56.55
Gene sequence:
>741_bases ATGCAGACGTTAACCAGAGTACTGCCGCCTCTCCGGCTGATTATGTTTTGTCAGTCAGGCGAAAATCCTACGCAGTTTCC GGATACCGGCGGCCTTTGCGTGGAGGACTGCGTTCGTCTCAGGACACCAGAAGGGCTGCTGGATCGGTTGCGTCGGTGGC CCGGCGCGATGGTGATATCCGCCGGACGGCCATCAACCCAGCTTCTGCTGTGGCAACAGGTTTTTCTGCGTTATCCGCGG ACAGTGGTTTTTTGCAGCAGTAACGCGTTTTTACCGGTTGACGTCAGCGTGGAAGGTTACTTCCGCCATCTGAGGCTGAT TAAACGCGCCATGTCGGTAAGGGTTCTGGCCAGAATGGCTGAGCTTGCCATATGGTCATCACTACAGACATCGCCTTACG AGGAGGAGATGAAAAGCGCGTTGAGCGTGCCGGAGCTGGTGATGGAGATAAACAGCCGCACGCTGGTCAGGTTACTGTCA GAGCGTCTGCCAAAACAGGGACGGCGGGTGCTGGGATTACTGTTGTCAGGCTGTAGCCCGGAAATGACGGCCCGTATGCT GGGAACCGGCGTGAGGCAGGTCTGGCTCGCGGAGCAGACGCTGAAACAACGCTGGGATATCCCGACAGGAGTACCGCTAT CTGATGCGGTAAGAATAAGGATACCGGACGTCGGTCCGGACATCAGTCAACAGAGTGGGTTGGTAAAAACTGGGGCCGGT AACGCACCGGATTTATGCTGA
Upstream 100 bases:
>100_bases AAGTGCCGGTACAGTATGGGCGCAAAAATATTTTTGCTCCTGCTGGCGGTCTCCACCGTCGCAGCGTTGTTCAGCCTGTA CCAGGTTCTGACGTACTGAT
Downstream 100 bases:
>100_bases CAGCATATTTACATCATGCCGCGCGGTATTCAGACCCATAATGTTGCGTTCTGAATGAGTTATCTTCACAAAATAAATAT GGCAATCATCGTTGTCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MQTLTRVLPPLRLIMFCQSGENPTQFPDTGGLCVEDCVRLRTPEGLLDRLRRWPGAMVISAGRPSTQLLLWQQVFLRYPR TVVFCSSNAFLPVDVSVEGYFRHLRLIKRAMSVRVLARMAELAIWSSLQTSPYEEEMKSALSVPELVMEINSRTLVRLLS ERLPKQGRRVLGLLLSGCSPEMTARMLGTGVRQVWLAEQTLKQRWDIPTGVPLSDAVRIRIPDVGPDISQQSGLVKTGAG NAPDLC
Sequences:
>Translated_246_residues MQTLTRVLPPLRLIMFCQSGENPTQFPDTGGLCVEDCVRLRTPEGLLDRLRRWPGAMVISAGRPSTQLLLWQQVFLRYPR TVVFCSSNAFLPVDVSVEGYFRHLRLIKRAMSVRVLARMAELAIWSSLQTSPYEEEMKSALSVPELVMEINSRTLVRLLS ERLPKQGRRVLGLLLSGCSPEMTARMLGTGVRQVWLAEQTLKQRWDIPTGVPLSDAVRIRIPDVGPDISQQSGLVKTGAG NAPDLC >Mature_246_residues MQTLTRVLPPLRLIMFCQSGENPTQFPDTGGLCVEDCVRLRTPEGLLDRLRRWPGAMVISAGRPSTQLLLWQQVFLRYPR TVVFCSSNAFLPVDVSVEGYFRHLRLIKRAMSVRVLARMAELAIWSSLQTSPYEEEMKSALSVPELVMEINSRTLVRLLS ERLPKQGRRVLGLLLSGCSPEMTARMLGTGVRQVWLAEQTLKQRWDIPTGVPLSDAVRIRIPDVGPDISQQSGLVKTGAG NAPDLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27513; Mature: 27513
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLTRVLPPLRLIMFCQSGENPTQFPDTGGLCVEDCVRLRTPEGLLDRLRRWPGAMVIS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEE AGRPSTQLLLWQQVFLRYPRTVVFCSSNAFLPVDVSVEGYFRHLRLIKRAMSVRVLARMA CCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ELAIWSSLQTSPYEEEMKSALSVPELVMEINSRTLVRLLSERLPKQGRRVLGLLLSGCSP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHCCCH EMTARMLGTGVRQVWLAEQTLKQRWDIPTGVPLSDAVRIRIPDVGPDISQQSGLVKTGAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCC NAPDLC CCCCCC >Mature Secondary Structure MQTLTRVLPPLRLIMFCQSGENPTQFPDTGGLCVEDCVRLRTPEGLLDRLRRWPGAMVIS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEE AGRPSTQLLLWQQVFLRYPRTVVFCSSNAFLPVDVSVEGYFRHLRLIKRAMSVRVLARMA CCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH ELAIWSSLQTSPYEEEMKSALSVPELVMEINSRTLVRLLSERLPKQGRRVLGLLLSGCSP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHCCCH EMTARMLGTGVRQVWLAEQTLKQRWDIPTGVPLSDAVRIRIPDVGPDISQQSGLVKTGAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCC NAPDLC CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA