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The map label for this gene is rfbD [H]

Identifier: 29142566

GI number: 29142566

Start: 2220752

End: 2221846

Strand: Reverse

Name: rfbD [H]

Synonym: t2157

Alternate gene names: 29142566

Gene position: 2221846-2220752 (Counterclockwise)

Preceding gene: 29142567

Following gene: 29142565

Centisome position: 46.37

GC content: 38.54

Gene sequence:

>1095_bases
GTGTCTGCGAACAGAGTGACAAAAATAATGCAACGTAAAAAGATACTAATTGTAGGTGCGGGCCTTTCAGGCGCAGTAAT
AGCACGCCAGTTAGCCGAGCAGGGACATGTAGTCAATATTATTGATCAACGTTCGCATATCGGTAGTAACGCTTATGATG
CCCGAGATGAGCACACGGGTATTATGGTGTACGTTTATGGTCCTCATATTTTTCATACTGATAATGAAACTGTATGGAAT
TATGTAAATAAATACGCTGAGATGATGCCTTATATCAATAAGGTTAAGGCCACAGTAAATGGTCAGGTATTTTCTCTACC
TATCAATCTTCATACCATCAATCAATTTTTTGGTGTCGCCTGCTCACCTGATGACGCCAGGAAATTACTGCTTCAAAAAT
GTGATAGCACCATTCTGGAACCACAAAATTTTGAGCAACAGGCCTTGCGTTTCATTGGTAAAGAGTTATATGAAGCCTTT
TTTAAAGGTTATACCATTAAACAATGGGGGCTTCATCCTTCCGCGTTACCCGCTTCTGTATTGAAACGTATCCCTGTTCG
TTTTAATTATGATGATAACTATTTCAATCATAAGTTTCAGGGAATACCAAAATTTGGTTATACACAAATGGTCAAGTCCA
TTGTCGAACACGAAAATATCGCTGTTGAACTATGTCGCTCCTTCACTCAAGAAATGCGGACAAATTATGATCATGTTTTT
TTCAGTGGCGCGCTGGATGCCTTTTACTCCTGTCAATATGGCCGACTGGAATATCGTACATTAGACTTTAAAAAAATAAT
TTGCCAGAGTGATTATCAAGGATGCGCAGTAATGAATTATTGTTCAATAGATACTCCTTATACTCGGATTACTGAGCACA
AATATTTTTCTCCGTGGGAGAGACATGAAGCTTCAATATGTTATCAAGAATATAGTCGGGAATGTGAAGCTGGTGATATA
CCCTACTATCCTGTTCGCAGGGCAGATAAAATGGATTTACTGAATAAATATCTGTCGCGGGCTAAAAAAGAAAAAATATT
ACTTTCATTGGTCGTCTTGGCACTTATCGTTATCTCGATATGGACATCACGATAG

Upstream 100 bases:

>100_bases
GTGGCGGTAGCGTGGAATTATCTGGATGCGTTGAGTAAATTTCACTTTACTCTTCTGATATAAATGAAAATGGTTCTGGA
TAAACTATCTAATATTATCT

Downstream 100 bases:

>100_bases
CTGAAGCATTACAGACGGCGGACGTATACTTAACGTCGCTATATGAACAAAAAGAAATGCCAGCTTTTACAGTTACCGTT
TGATGAAGTGTACAGCGCTA

Product: UDP-galactopyranose mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSANRVTKIMQRKKILIVGAGLSGAVIARQLAEQGHVVNIIDQRSHIGSNAYDARDEHTGIMVYVYGPHIFHTDNETVWN
YVNKYAEMMPYINKVKATVNGQVFSLPINLHTINQFFGVACSPDDARKLLLQKCDSTILEPQNFEQQALRFIGKELYEAF
FKGYTIKQWGLHPSALPASVLKRIPVRFNYDDNYFNHKFQGIPKFGYTQMVKSIVEHENIAVELCRSFTQEMRTNYDHVF
FSGALDAFYSCQYGRLEYRTLDFKKIICQSDYQGCAVMNYCSIDTPYTRITEHKYFSPWERHEASICYQEYSRECEAGDI
PYYPVRRADKMDLLNKYLSRAKKEKILLSLVVLALIVISIWTSR

Sequences:

>Translated_364_residues
MSANRVTKIMQRKKILIVGAGLSGAVIARQLAEQGHVVNIIDQRSHIGSNAYDARDEHTGIMVYVYGPHIFHTDNETVWN
YVNKYAEMMPYINKVKATVNGQVFSLPINLHTINQFFGVACSPDDARKLLLQKCDSTILEPQNFEQQALRFIGKELYEAF
FKGYTIKQWGLHPSALPASVLKRIPVRFNYDDNYFNHKFQGIPKFGYTQMVKSIVEHENIAVELCRSFTQEMRTNYDHVF
FSGALDAFYSCQYGRLEYRTLDFKKIICQSDYQGCAVMNYCSIDTPYTRITEHKYFSPWERHEASICYQEYSRECEAGDI
PYYPVRRADKMDLLNKYLSRAKKEKILLSLVVLALIVISIWTSR
>Mature_363_residues
SANRVTKIMQRKKILIVGAGLSGAVIARQLAEQGHVVNIIDQRSHIGSNAYDARDEHTGIMVYVYGPHIFHTDNETVWNY
VNKYAEMMPYINKVKATVNGQVFSLPINLHTINQFFGVACSPDDARKLLLQKCDSTILEPQNFEQQALRFIGKELYEAFF
KGYTIKQWGLHPSALPASVLKRIPVRFNYDDNYFNHKFQGIPKFGYTQMVKSIVEHENIAVELCRSFTQEMRTNYDHVFF
SGALDAFYSCQYGRLEYRTLDFKKIICQSDYQGCAVMNYCSIDTPYTRITEHKYFSPWERHEASICYQEYSRECEAGDIP
YYPVRRADKMDLLNKYLSRAKKEKILLSLVVLALIVISIWTSR

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=334, Percent_Identity=38.622754491018, Blast_Score=247, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR016040
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF01266 DAO; PF03275 GLF [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 42186; Mature: 42055

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANRVTKIMQRKKILIVGAGLSGAVIARQLAEQGHVVNIIDQRSHIGSNAYDARDEHTG
CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCC
IMVYVYGPHIFHTDNETVWNYVNKYAEMMPYINKVKATVNGQVFSLPINLHTINQFFGVA
EEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEHEEHHHHHCCC
CSPDDARKLLLQKCDSTILEPQNFEQQALRFIGKELYEAFFKGYTIKQWGLHPSALPASV
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHH
LKRIPVRFNYDDNYFNHKFQGIPKFGYTQMVKSIVEHENIAVELCRSFTQEMRTNYDHVF
HHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
FSGALDAFYSCQYGRLEYRTLDFKKIICQSDYQGCAVMNYCSIDTPYTRITEHKYFSPWE
EHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCCHH
RHEASICYQEYSRECEAGDIPYYPVRRADKMDLLNKYLSRAKKEKILLSLVVLALIVISI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTSR
HCCC
>Mature Secondary Structure 
SANRVTKIMQRKKILIVGAGLSGAVIARQLAEQGHVVNIIDQRSHIGSNAYDARDEHTG
CHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCC
IMVYVYGPHIFHTDNETVWNYVNKYAEMMPYINKVKATVNGQVFSLPINLHTINQFFGVA
EEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEHEEHHHHHCCC
CSPDDARKLLLQKCDSTILEPQNFEQQALRFIGKELYEAFFKGYTIKQWGLHPSALPASV
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHH
LKRIPVRFNYDDNYFNHKFQGIPKFGYTQMVKSIVEHENIAVELCRSFTQEMRTNYDHVF
HHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
FSGALDAFYSCQYGRLEYRTLDFKKIICQSDYQGCAVMNYCSIDTPYTRITEHKYFSPWE
EHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCCHH
RHEASICYQEYSRECEAGDIPYYPVRRADKMDLLNKYLSRAKKEKILLSLVVLALIVISI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTSR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559323 [H]