Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29142562
Identifier: 29142562
GI number: 29142562
Start: 2214118
End: 2214951
Strand: Reverse
Name: 29142562
Synonym: t2151
Alternate gene names: NA
Gene position: 2214951-2214118 (Counterclockwise)
Preceding gene: 29142563
Following gene: 29142561
Centisome position: 46.22
GC content: 31.77
Gene sequence:
>834_bases ATGGAAAAGAGTCTTTTAGTTATTGTCCGACATAAACCTGGGCGTACTCGTCTATTAATGCGGGCCTTGCAATCCATTAA TGACCAGACGTTCAAAAAAATAAATATTATCATTTTCTGCATGGAGGAAGAATTGAAATGTCACAATGTGGATGATTTTT ATCTGAAAGAACTGTCAAATATATATAGTGTTATCTACGACGAAAACTGTATCTTTAATGCTATTAAGATGTCTGAATCT AATTATTTATGCTTTATGGATGATGACGATTCCTGGGCCCCTGAATATGTGTCAAGGCTACTCAGTGTTTTGGCGAATAT ACAGTCAACGTATTCATCTGTAAATGCAATAGCATGCCATACAAATAAAGTTGCTGAGATTGCGGAAAATAATAGAATAA TTATAAATTCAACGCAACCATGGAACCACTATTTAAATGCTGGCCCTGTTAGTTTTGATGTTATTTATTACAGGAATTCT ATTCCACTATCCTCGTGTTTATTCGATAAAAATTCTGTTATCGATGTGATTGAAAGTCATAAATTATCCTCTCCTGCATT TTTCTGGCCTTTTTTTATTCATTATCTGGCAGAAAATGATGTTTGGATCTTACCTGAAGCACTGGCATTTTATCATTTCA GAGAAAATGATGACTTTGAATTTGGCAATTATACCGTAATTAACAATGAGTTATTTGATATAGAGTGCAAAATTGCAGAA AATAAAATGATGAGAAGTATTGATGACTCATCATTGCTCAATGTGTTACTTTCAAATATTGCTAACAATAGTCTTTTTCA TAAAATTTCTTATATTGAAAATAAGATTAAATAA
Upstream 100 bases:
>100_bases CTGGTGTCAGTCTAATAAAATATTATAATCCTTACCCAATGTCAGCATTCATTCATAGGGTGTTAATTTTTATATATACC GTAAAACGCGAAATCAGAAT
Downstream 100 bases:
>100_bases AATATGGATATGAACTTTAAAAAATACAAGACCGTAAGCTTTGATATCTTTGATACATTGGTTAGCCGGAGGATTTACCG TCCCAGAGATTTGTTTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MEKSLLVIVRHKPGRTRLLMRALQSINDQTFKKINIIIFCMEEELKCHNVDDFYLKELSNIYSVIYDENCIFNAIKMSES NYLCFMDDDDSWAPEYVSRLLSVLANIQSTYSSVNAIACHTNKVAEIAENNRIIINSTQPWNHYLNAGPVSFDVIYYRNS IPLSSCLFDKNSVIDVIESHKLSSPAFFWPFFIHYLAENDVWILPEALAFYHFRENDDFEFGNYTVINNELFDIECKIAE NKMMRSIDDSSLLNVLLSNIANNSLFHKISYIENKIK
Sequences:
>Translated_277_residues MEKSLLVIVRHKPGRTRLLMRALQSINDQTFKKINIIIFCMEEELKCHNVDDFYLKELSNIYSVIYDENCIFNAIKMSES NYLCFMDDDDSWAPEYVSRLLSVLANIQSTYSSVNAIACHTNKVAEIAENNRIIINSTQPWNHYLNAGPVSFDVIYYRNS IPLSSCLFDKNSVIDVIESHKLSSPAFFWPFFIHYLAENDVWILPEALAFYHFRENDDFEFGNYTVINNELFDIECKIAE NKMMRSIDDSSLLNVLLSNIANNSLFHKISYIENKIK >Mature_277_residues MEKSLLVIVRHKPGRTRLLMRALQSINDQTFKKINIIIFCMEEELKCHNVDDFYLKELSNIYSVIYDENCIFNAIKMSES NYLCFMDDDDSWAPEYVSRLLSVLANIQSTYSSVNAIACHTNKVAEIAENNRIIINSTQPWNHYLNAGPVSFDVIYYRNS IPLSSCLFDKNSVIDVIESHKLSSPAFFWPFFIHYLAENDVWILPEALAFYHFRENDDFEFGNYTVINNELFDIECKIAE NKMMRSIDDSSLLNVLLSNIANNSLFHKISYIENKIK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32252; Mature: 32252
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSLLVIVRHKPGRTRLLMRALQSINDQTFKKINIIIFCMEEELKCHNVDDFYLKELSN CCCCEEEEEECCCCHHHHHHHHHHHCCHHHEEEEEEEEEEECCCCCCCCCCHHHHHHHHH IYSVIYDENCIFNAIKMSESNYLCFMDDDDSWAPEYVSRLLSVLANIQSTYSSVNAIACH HHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEC TNKVAEIAENNRIIINSTQPWNHYLNAGPVSFDVIYYRNSIPLSSCLFDKNSVIDVIESH CCHHHHHHCCCEEEEECCCCHHHCCCCCCEEEEEEEEECCCCHHHHHCCCCCHHHHHHHC KLSSPAFFWPFFIHYLAENDVWILPEALAFYHFRENDDFEFGNYTVINNELFDIECKIAE CCCCCCHHHHHHHHHHHCCCEEEEEHHHEEEEECCCCCCCCCCEEEECCEEEEEEEEEHH NKMMRSIDDSSLLNVLLSNIANNSLFHKISYIENKIK HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MEKSLLVIVRHKPGRTRLLMRALQSINDQTFKKINIIIFCMEEELKCHNVDDFYLKELSN CCCCEEEEEECCCCHHHHHHHHHHHCCHHHEEEEEEEEEEECCCCCCCCCCHHHHHHHHH IYSVIYDENCIFNAIKMSESNYLCFMDDDDSWAPEYVSRLLSVLANIQSTYSSVNAIACH HHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEC TNKVAEIAENNRIIINSTQPWNHYLNAGPVSFDVIYYRNSIPLSSCLFDKNSVIDVIESH CCHHHHHHCCCEEEEECCCCHHHCCCCCCEEEEEEEEECCCCHHHHHCCCCCHHHHHHHC KLSSPAFFWPFFIHYLAENDVWILPEALAFYHFRENDDFEFGNYTVINNELFDIECKIAE CCCCCCHHHHHHHHHHHCCCEEEEEHHHEEEEECCCCCCCCCCEEEECCEEEEEEEEEHH NKMMRSIDDSSLLNVLLSNIANNSLFHKISYIENKIK HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA