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The map label for this gene is abrB [H]

Identifier: 29142559

GI number: 29142559

Start: 2210492

End: 2211538

Strand: Direct

Name: abrB [H]

Synonym: t2147

Alternate gene names: 29142559

Gene position: 2210492-2211538 (Clockwise)

Preceding gene: 29142558

Following gene: 29142575

Centisome position: 46.13

GC content: 56.35

Gene sequence:

>1047_bases
ATGCCGATTTTGCAGTGGTTTTTGTTGTTCCTGTTATCGCTGCTCATTTCCCTTATTTTTCTCTATCTGCACCTTCCGGC
GGCGATGCTGCTTGGTCCAATGATTGCGGGTATCGTGTTGAGTTTGCGAGGTAGCACGCTACAACTTCCTCGCGGTATTT
TTCTCGCCGCGCAGGCGATTCTCGGCTGTATGATCGCCCAAAATCTAACCGGTTCGATATTGACCACCCTCGCCCTCTAC
TGGCCGGTCGTGCTTTTTGTGTTGCTGGTGACGCTGCTTTCCAGCGCGGTAGTCGGCTGGCTGCTGGTACGTTACAGCTC
GCTGCCCGGCAACACCGGCGCATGGGGGTCTTCGCCGGGCGGCGCGGCGGCAATGGTAGCGATGGCGCAAGATTACGGGG
CGGATATCCGCCTGGTGGCGTTTATGCAGTATCTACGGGTACTGTTTGTGGCTGGCGCGGCGGTGCTGGTGACACGCCTG
ATACTCGGCGACAGCGCGGCAACGGTCAGCCAACAGGTGGTCTGGTTTCCGCCGCTTAGCGGTAATTTATTGACGACGCT
GCTATTAGCGATCGTGGCGGGCATTGCCGGTCGCCTGATGCGTATCCCTTCCGGCACGATGCTGCTCCCCATGTTGGCAG
GCGCGCTTCTCCATTCGCAAGGCATCATTGAAATTGAATTACCCGAATGGCTGCTGGCCGTGGCGTATATGGCGATAGGC
TGGCGTATTGGGCTGGGTTTTGACAGACAGGTGTTTTTTATGGCGCTGCGGCCATTGCCGCAAATCTTATTGTCAATTTT
CGCGCTGATGGCGATTTGCGCCGCGATGGCGTGGGGAATGGCTTACTACATGCAGATTGATTTTATGACGGCTTATCTCG
CCACCAGTCCCGGGGGTCTGGATACGGTTGCCGCGATCGCGGCAGGAAGCAGTGCCGATATGGCGCTCATCATGGCAATG
CAAACCCTACGGCTGTTCAGCATTCTGTTAACTGGGCCAGCAGTGGCCCGTTTTATATCAACCTATGCGCCCAAACAACC
TTTGTAG

Upstream 100 bases:

>100_bases
GTACATTTTCCCTTTTTTCTTATCCTCATTATTTTATTCTTACCCCGTTACTCTCTATGATTAATTAAGGTTTCGCTAAA
TATCATTCAGGGAGCATGGA

Downstream 100 bases:

>100_bases
GGCTGATAAGCGTCGCGCCATCAGACAATAGCCGCTCGCCGATGGCGGTTCCGGCTATTTCTGGCAATGCGCGCACCAGT
AAAACGGGCGTGAGGAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALY
WPVVLFVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRL
ILGDSAATVSQQVVWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAM
QTLRLFSILLTGPAVARFISTYAPKQPL

Sequences:

>Translated_348_residues
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALY
WPVVLFVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRL
ILGDSAATVSQQVVWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAM
QTLRLFSILLTGPAVARFISTYAPKQPL
>Mature_347_residues
PILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALYW
PVVLFVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLI
LGDSAATVSQQVVWFPPLSGNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIGW
RIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAMQ
TLRLFSILLTGPAVARFISTYAPKQPL

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=346, Percent_Identity=81.2138728323699, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 37165; Mature: 37033

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGCMIAQNLTGSILTTLALYWPVVLFVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAATVSQQVVWFPPLS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCC
GNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAVARFISTYAPKQPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGCMIAQNLTGSILTTLALYWPVVLFVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAATVSQQVVWFPPLS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCC
GNLLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAVARFISTYAPKQPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]