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The map label for this gene is ybgE [H]

Identifier: 29142545

GI number: 29142545

Start: 2193504

End: 2193785

Strand: Reverse

Name: ybgE [H]

Synonym: t2133

Alternate gene names: 29142545

Gene position: 2193785-2193504 (Counterclockwise)

Preceding gene: 29142546

Following gene: 29142544

Centisome position: 45.78

GC content: 51.77

Gene sequence:

>282_bases
ATGAAGTATATTTATGCGGTAATGGACAAGCGCCTCTTAAGGGCGCTTTCCTTCGTGATGGCGATAGTGCTGGCAGGATG
TATGTTCTGGGACCCGTTACGGTTTGCCGCCAGGACCAGCACGCTTGAAATCTGGCACGGATTATTGCTGATGTGGGCGG
TTTGCGCAGGCATAATCCACGGCGTGGGTTTTCGCCCTGAATCCGTACACTGGCAAGGGATTTTTTGTCCGCTCCTTGCG
GATATCGTCCTTATCGTCGGCCTGATTTTCTTCTTCTTGTGA

Upstream 100 bases:

>100_bases
TTAAGTTGCATCGCGGCGGCAAGGCTGCGAATCCCCAGGAGCTTACATCAGTAAGTGACTGGGGTGAGCAGCCGCAGCCA
ACAAAGAGGCAGCTTAGAGG

Downstream 100 bases:

>100_bases
ATAAGAAACCTCCTTAAAAATATAGGGGCTTGCATAAGCCCATATATTTTTACTCTCCCTTAACTTCCCCCCATTCCCAA
GCCTCATTCCTACGCGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKYIYAVMDKRLLRALSFVMAIVLAGCMFWDPLRFAARTSTLEIWHGLLLMWAVCAGIIHGVGFRPESVHWQGIFCPLLA
DIVLIVGLIFFFL

Sequences:

>Translated_93_residues
MKYIYAVMDKRLLRALSFVMAIVLAGCMFWDPLRFAARTSTLEIWHGLLLMWAVCAGIIHGVGFRPESVHWQGIFCPLLA
DIVLIVGLIFFFL
>Mature_93_residues
MKYIYAVMDKRLLRALSFVMAIVLAGCMFWDPLRFAARTSTLEIWHGLLLMWAVCAGIIHGVGFRPESVHWQGIFCPLLA
DIVLIVGLIFFFL

Specific function: Unknown

COG id: COG3790

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786956, Length=89, Percent_Identity=87.6404494382023, Blast_Score=162, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011846 [H]

Pfam domain/function: PF09600 Cyd_oper_YbgE [H]

EC number: NA

Molecular weight: Translated: 10602; Mature: 10602

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIYAVMDKRLLRALSFVMAIVLAGCMFWDPLRFAARTSTLEIWHGLLLMWAVCAGIIH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVGFRPESVHWQGIFCPLLADIVLIVGLIFFFL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKYIYAVMDKRLLRALSFVMAIVLAGCMFWDPLRFAARTSTLEIWHGLLLMWAVCAGIIH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVGFRPESVHWQGIFCPLLADIVLIVGLIFFFL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]