Click here to switch to the map view.

The map label for this gene is ybhA [H]

Identifier: 29142518

GI number: 29142518

Start: 2167476

End: 2168294

Strand: Direct

Name: ybhA [H]

Synonym: t2103

Alternate gene names: 29142518

Gene position: 2167476-2168294 (Clockwise)

Preceding gene: 29142516

Following gene: 29142523

Centisome position: 45.23

GC content: 53.11

Gene sequence:

>819_bases
ATGACTGCACGCGTGATTGCCCTCGATTTAGACGGAACATTATTAACCCCGCATAAAACCTTACTCCCCTCCTCGCTTGA
AGCGCTATCACGCGCCAAAGAGGCGGGCTTTCAACTTATCATTGTCACTGGTCGCCATCACGTTGCTATTCATCCTTTTT
ATCAGGCGCTGGCGCTGGAAACACCTGCTATTTGCTGCAACGGCACCTATTTGTATGATTATCAAGCTAAAACTGTCCTG
GATGCCGATCCTATGCCCGTGGATAAGGCGTTGCAGTTGATTGATTTACTGGATGAGCATCAGATTCACGGCCTGATGTA
TGTTGATGACGCTATGCTTTACGAACACCCAACCGGTCACGTCGTGCGTACCTCCCGGTGGGCGCAGACCTTGCCGCCGG
AGCAACGTCCGACCTTTACACAGGTCTCTTCGTTGGCGCAGGCGGCGCGCGACGTGAATGCCGTGTGGAAGTTTGCGCTT
ACCGATGAAGATATTCCCAGACTACAGCGGTTCGGTCAGCATGTTGAACAGGCGCTTGGCCTGGAGTGTGAATGGTCATG
GCACGATCAGGTGGATATCGCGCGCAAAGGCAACAGTAAAGGCAAGCGCCTTACCCAGTGGATAGAAGCGCAGGGAGGGT
CAATGAAAAATGTGATCGCTTTCGGCGATAACTACAACGACATCAGTATGCTGGAGGCGGCAGGCACCGGCGTTGCGATG
GGCAACGCCGATGAGGCGGTGAAAGCGCGCGCTGACTTTGTGATCGGCGATAACACTACCGATAGCATCGCCAAATTTAT
ATACACCCACCTGCTATAG

Upstream 100 bases:

>100_bases
TGACGGCGAATGCTGAATTCAGACGCAGAATTTTGTCTGCTTACCGTCCCGGTGTACCATGCCGACAGACGGAATTATTA
CTCTTAATCTGGAAAAAATT

Downstream 100 bases:

>100_bases
TCAGGCGGTGATAGAAACGCTTTTCACCTGCGCGTAAAGCCACAGGCCAGGCTTGATATTCAGCTCATCCCTGGCCCACG
GGCTTATTCGCGCCCACAGC

Product: phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALETPAICCNGTYLYDYQAKTVL
DADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGHVVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFAL
TDEDIPRLQRFGQHVEQALGLECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM
GNADEAVKARADFVIGDNTTDSIAKFIYTHLL

Sequences:

>Translated_272_residues
MTARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALETPAICCNGTYLYDYQAKTVL
DADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGHVVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFAL
TDEDIPRLQRFGQHVEQALGLECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM
GNADEAVKARADFVIGDNTTDSIAKFIYTHLL
>Mature_271_residues
TARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALETPAICCNGTYLYDYQAKTVLD
ADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGHVVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFALT
DEDIPRLQRFGQHVEQALGLECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAMG
NADEAVKARADFVIGDNTTDSIAKFIYTHLL

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates pyridoxalphosphate and erythrose 4-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=84.1911764705882, Blast_Score=494, Evalue=1e-141,
Organism=Escherichia coli, GI1787043, Length=262, Percent_Identity=25.1908396946565, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 30168; Mature: 30036

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALE
CCEEEEEEECCCEEECCCHHHCHHHHHHHHHHHHCCEEEEEEECCCEEEECHHHHHHHHC
TPAICCNGTYLYDYQAKTVLDADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGH
CCCEEECCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCHHEEECCCCC
VVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFALTDEDIPRLQRFGQHVEQALG
EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHC
LECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM
CCEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEE
GNADEAVKARADFVIGDNTTDSIAKFIYTHLL
CCCHHHHHHHCCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TARVIALDLDGTLLTPHKTLLPSSLEALSRAKEAGFQLIIVTGRHHVAIHPFYQALALE
CEEEEEEECCCEEECCCHHHCHHHHHHHHHHHHCCEEEEEEECCCEEEECHHHHHHHHC
TPAICCNGTYLYDYQAKTVLDADPMPVDKALQLIDLLDEHQIHGLMYVDDAMLYEHPTGH
CCCEEECCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCEEEEECCHHEEECCCCC
VVRTSRWAQTLPPEQRPTFTQVSSLAQAARDVNAVWKFALTDEDIPRLQRFGQHVEQALG
EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHC
LECEWSWHDQVDIARKGNSKGKRLTQWIEAQGGSMKNVIAFGDNYNDISMLEAAGTGVAM
CCEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEE
GNADEAVKARADFVIGDNTTDSIAKFIYTHLL
CCCHHHHHHHCCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7665460; 8564363; 8905232; 9278503 [H]