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The map label for this gene is ycaM [H]

Identifier: 29142387

GI number: 29142387

Start: 2018166

End: 2019587

Strand: Reverse

Name: ycaM [H]

Synonym: t1965

Alternate gene names: 29142387

Gene position: 2019587-2018166 (Counterclockwise)

Preceding gene: 29142388

Following gene: 29142381

Centisome position: 42.15

GC content: 47.47

Gene sequence:

>1422_bases
ATGCCGAATGTGCAGGAAAAACAGTTGCGATGGTACAACATCGCCCTGATGTCGTTTATTACCGTTTGGGGATTCGGCAA
TGTTGTCAATAACTATGCTAACCAGGGGTTAGTGGTTGTCTTCTCCTGGGTGTTTATTTTTGCGCTCTATTTTATTCCTT
ATGCCTTAATCGTGGGGCAACTGGGCTCAACCTTCAAAGAGGGAAAAGGGGGCGTCAGTACCTGGATTAAGCATACGATG
GGGCCGGGGTTGGCTTACCTTGCGGCATGGACTTATTGGGTCGTGCATATTCCCTACCTGGCGCAAAAGCCGCAGGCGAT
ACTCATTGCATTGGGATGGGCTTTAAAAGGCGACGGCTCGTTGATAAAAGAATATACCGTCGTTGCCTTGCAGGGGCTGA
CGCTGGCATTGTTTGTTTTCTTTATGTGGGTTGCTTCCCGGGGGATGAAATCGCTAAAGGTTGTTGGGTCTGTGGCTGGG
ATTGCCATGTTTATCATGTCAATTTTATATGTTGTGATGGCAGTGACCGCGCCAGCAATTACAAACGTTGAAATTGCGAC
CGCTAACATCACCTGGCAGTCATTTATTCCTCATATCGATTTTACCTATATCACCACCATCTCTATGTTGGTCTTTGCGG
TTGGTGGGGCAGAGAAGATCTCGCCTTATGTCAACCAGACGCGGAATCCAGGAAAAGAATTTCCGAAGGGGATGCTCTTT
TTAGCCGTCATGGTTGCGGTCTGCGCTATCCTCGGTTCGTTGGCGATGGGAATGATGTTTGATTCCCGGCATATACCTGA
CGATTTAATGACCAATGGGCAATATTATGCATTCCAGAAATTGGGTGAGTATTACCATATGGGTAATTCATTAATGGTGA
TTTATGCCATTGCCAATACTCTGGGGCAAATCGCCGCGCTGGTGTTTTCTATTGATGCGCCACTGAAAGTCTTACTGGGT
GATGCAGACAGTAAATATATCCCGCAGCGCTTATGTCGTACTAACGCTTCAGGTACACCAGTTAACGGTTATTTGCTGAC
ATTAGTGTTGGTCGCTATCTTGATTATGTTGCCAACGCTTGGCATCGGCGATATGAACAACCTGTACAAATGGCTGCTTA
ATCTCAATTCAGTCGTTATGCCGCTGCGCTATCTGTGGGTATTTGTCGCCTTTATTGCCGTCATTCGACTGGCGCAAAAG
TACAAACCCGAATATGTGTTTATTCGCAACCGGGCGTTGGCGTTAACTGTGGGAATATGGTGTTTTGCCTTCACCGCGTT
TGCCTGCCTTACCGGTATTTTCCCCAAAATGGAGGCGTTCACGCCGGAGTGGGCATTCCAGCTGACGTTGAACATCGTGA
CACCTTTTGTCCTGGTCGGGTTGGGATTAATTTTCCCACTGCTGGCGCGTAGAAACACATAA

Upstream 100 bases:

>100_bases
TTATAATTTTGCGCTCCTCTATTTTCTCTCTTCGTCTTTACCGCGCATAATCCCCCGCTTCATTTATAGTAATAGCATTG
TGTTCACGAAGGATCGCGTT

Downstream 100 bases:

>100_bases
CGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCCTTTTAAGGTTACAGGTGCCTGGGTTCCAGGCGGAGACCACG
GTATTAACAGGCGCCGGGGC

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MPNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTM
GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAG
IAMFIMSILYVVMAVTAPAITNVEIATANITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANTLGQIAALVFSIDAPLKVLLG
DADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQK
YKPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWAFQLTLNIVTPFVLVGLGLIFPLLARRNT

Sequences:

>Translated_473_residues
MPNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTM
GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAG
IAMFIMSILYVVMAVTAPAITNVEIATANITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANTLGQIAALVFSIDAPLKVLLG
DADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQK
YKPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWAFQLTLNIVTPFVLVGLGLIFPLLARRNT
>Mature_472_residues
PNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQLGSTFKEGKGGVSTWIKHTMG
PGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGSLIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAGI
AMFIMSILYVVMAVTAPAITNVEIATANITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLFL
AVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANTLGQIAALVFSIDAPLKVLLGD
ADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQKY
KPEYVFIRNRALALTVGIWCFAFTAFACLTGIFPKMEAFTPEWAFQLTLNIVTPFVLVGLGLIFPLLARRNT

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081798, Length=469, Percent_Identity=92.9637526652452, Blast_Score=897, Evalue=0.0,
Organism=Escherichia coli, GI48994921, Length=438, Percent_Identity=23.2876712328767, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI87082380, Length=464, Percent_Identity=22.4137931034483, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787768, Length=400, Percent_Identity=22.25, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52497; Mature: 52366

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSTFKEGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGS
HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECEECCCCH
LIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAGIAMFIMSILYVVMAVTAPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TNVEIATANITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
CCEEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHHHHHHHH
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGQIAALVFSIDAPLKVLLGDADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTL
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
GIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQKYKPEYVFIRNRALALTVGIW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
CFAFTAFACLTGIFPKMEAFTPEWAFQLTLNIVTPFVLVGLGLIFPLLARRNT
HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFIPYALIVGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGSTFKEGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWALKGDGS
HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECEECCCCH
LIKEYTVVALQGLTLALFVFFMWVASRGMKSLKVVGSVAGIAMFIMSILYVVMAVTAPAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TNVEIATANITWQSFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLF
CCEEEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHHHHHHHH
LAVMVAVCAILGSLAMGMMFDSRHIPDDLMTNGQYYAFQKLGEYYHMGNSLMVIYAIANT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LGQIAALVFSIDAPLKVLLGDADSKYIPQRLCRTNASGTPVNGYLLTLVLVAILIMLPTL
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
GIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVIRLAQKYKPEYVFIRNRALALTVGIW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
CFAFTAFACLTGIFPKMEAFTPEWAFQLTLNIVTPFVLVGLGLIFPLLARRNT
HHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]