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The map label for this gene is ycbC [H]

Identifier: 29142368

GI number: 29142368

Start: 1993296

End: 1994072

Strand: Direct

Name: ycbC [H]

Synonym: t1944

Alternate gene names: 29142368

Gene position: 1993296-1994072 (Clockwise)

Preceding gene: 29142360

Following gene: 29142382

Centisome position: 41.6

GC content: 56.76

Gene sequence:

>777_bases
ATGCTTTTTACGCTAAAGAAAGTGATTGGCGGCATGTTATTGCCGCTTCCGCTGATGTTGCTGATCATTGGCATCGGCCT
GGCGCTGCTCTGGTTTAGCCGCTTTCAGAAGACCGGAAAAGTATTTATCAGCGTAGGTTGGCTGGCGCTATTGCTATTAA
GCCTGCAACCCGTCTCTGACCATTTGCTGCGTCCGATAGAAAACCGCTACCCTACCTGGCAGGGTCCGCAAAAGGTGGAA
TATATTGTGGTTCTCGGCGGCGGCTATACCTGGAACCCGCAGTGGGCGCCGAGCTCTAATTTAATTAACAACAGCTTGCC
GCGGCTGGCGGAAGGCATTCGGCTGTGGCGCGCGAATCCGGGAGCCAGGCTGATTTTTACCGGCGGCGTAGCAAAAACCA
ATACGGTAAGCACGGCGGAAGTCGGCGCGCGGGTGGCGCAGTCGCTGGGCGTACCGCGTAGCGATATTATTACGCTGGAT
AAGCCAAAAGATACGGAAGAAGAAGCCGCCGCCGTTAAGCAGGCCATCGGCGACGCCCCTTTCCTGCTGGTAACCTCCGC
CTCGCATTTGCCGCGTGCGATGATTTTCTTTCAGCATGCCGGGCTGAATCCGCTTCCCGCGCCGGCGAATCAGTTGGCGA
TCGATTCGCCGCTCAATCCCTGGGAGCGGGCAATTCCGTCCCCGGTCTGGCTGATGCACAGCGATCGCGCTGGGTATGAA
ACATTAGGGCGACTTTGGCAATGGCTGAAAGGCATATCAGGCAAGCCAGGGGAGTAA

Upstream 100 bases:

>100_bases
TAAAACCGCTATTTTGTCACAGCCGCGGCGAGAATGAACCTGTCTGGTGTAATATCACCGTTAATCCTCCGCTATATGGT
TAAAAAAGGAACCAAAAAGG

Downstream 100 bases:

>100_bases
TGATTTCGCCGCCAGATCAAAATTGGTACGGTTAAAACGTCCGGTATTGACCAATTGCGCAACCTCGTCCCACAGCACAT
AGAGCCAACGCCGCCAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLFTLKKVIGGMLLPLPLMLLIIGIGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVE
YIVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDIITLD
KPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYE
TLGRLWQWLKGISGKPGE

Sequences:

>Translated_258_residues
MLFTLKKVIGGMLLPLPLMLLIIGIGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVE
YIVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDIITLD
KPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYE
TLGRLWQWLKGISGKPGE
>Mature_258_residues
MLFTLKKVIGGMLLPLPLMLLIIGIGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSDHLLRPIENRYPTWQGPQKVE
YIVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANPGARLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDIITLD
KPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYE
TLGRLWQWLKGISGKPGE

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=256, Percent_Identity=90.234375, Blast_Score=426, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28275; Mature: 28275

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTLKKVIGGMLLPLPLMLLIIGIGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSD
CCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCHHH
HLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANP
HHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHEECCC
GARLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIGDAP
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHCCCC
FLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYE
EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCEEEEECCCCCHH
TLGRLWQWLKGISGKPGE
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLFTLKKVIGGMLLPLPLMLLIIGIGLALLWFSRFQKTGKVFISVGWLALLLLSLQPVSD
CCEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCHHH
HLLRPIENRYPTWQGPQKVEYIVVLGGGYTWNPQWAPSSNLINNSLPRLAEGIRLWRANP
HHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHEECCC
GARLIFTGGVAKTNTVSTAEVGARVAQSLGVPRSDIITLDKPKDTEEEAAAVKQAIGDAP
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHCCCC
FLLVTSASHLPRAMIFFQHAGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRAGYE
EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCEEEEECCCCCHH
TLGRLWQWLKGISGKPGE
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]