| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142340
Identifier: 29142340
GI number: 29142340
Start: 1962286
End: 1962810
Strand: Reverse
Name: 29142340
Synonym: t1915
Alternate gene names: NA
Gene position: 1962810-1962286 (Counterclockwise)
Preceding gene: 29142341
Following gene: 29142339
Centisome position: 40.96
GC content: 55.24
Gene sequence:
>525_bases ATGAGCAACATCGACAAACGGGCGCTTCGTGAAGTGGCTGAGAGGGCTACGCCGGGGAATTGGCGCCGCACCTCATCACT GTTCAATGGCATCACGGTAACGCCATTTTCTCTTTGCGGTGAAGAAGTGACGTTGGCCCATACTGTTGAGAAACGTGACG CGGAATTTATCGCCGCAGCCAACCCCGCCACCATGCTGGCGCTGCTGGATGAGCTGGAAACCAAAGAGGAACAGCGCGCC AATTGGTTTCGGATGGCGCAGAAGTTAGGCGAGGATTTGGATACAGCAGAACGCCTCATAGCCGAACTGGACCAACGCCT GATTGAATACGCGGGAATTGCAACCCGTGAGGCTCGCCGGGTGGCAGAACTGGAGGCGCGGAAGGTCAACCTGTCAAAAC TCAGCGTTGGAGAAGTCATGCACATGACCGGATTCAGCCGGGATTATGCCGAGGGTTGGTGTGCTGGTAATGATAATGCG ATACACGAAATACGCACCGCTGGCATCAAGGTTAAGGAGTCGTGA
Upstream 100 bases:
>100_bases GTCAGGTAACGGGATTTTCAGCGCTGCCGGTGCTGGAGAAAAGCCCGGTAATGCAGGTTTATGGAGCATCCAAAATGAGC ATCAACAAGGGGGGAGCCCA
Downstream 100 bases:
>100_bases TGGAATCGCAATCTATTCTGGATATGTGCTGCGGCTCGCGCATGTTTTGGTTTAATAAGCGCGATGAACGCGCCGTATTC GCCGATATCCGCGCCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATMLALLDELETKEEQRA NWFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARRVAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNA IHEIRTAGIKVKES
Sequences:
>Translated_174_residues MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATMLALLDELETKEEQRA NWFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARRVAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNA IHEIRTAGIKVKES >Mature_173_residues SNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATMLALLDELETKEEQRAN WFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARRVAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNAI HEIRTAGIKVKES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19494; Mature: 19363
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAA CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCHHEECC NPATMLALLDELETKEEQRANWFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH VAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNAIHEIRTAGIKVKES HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHCEEEECC >Mature Secondary Structure SNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAA CCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCHHEECC NPATMLALLDELETKEEQRANWFRMAQKLGEDLDTAERLIAELDQRLIEYAGIATREARR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH VAELEARKVNLSKLSVGEVMHMTGFSRDYAEGWCAGNDNAIHEIRTAGIKVKES HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA