Click here to switch to the map view.

The map label for this gene is 29142320

Identifier: 29142320

GI number: 29142320

Start: 1950505

End: 1951908

Strand: Reverse

Name: 29142320

Synonym: t1894

Alternate gene names: NA

Gene position: 1951908-1950505 (Counterclockwise)

Preceding gene: 29142321

Following gene: 29142319

Centisome position: 40.73

GC content: 50.14

Gene sequence:

>1404_bases
ATGACTTCTACGCCGATATCCAGACCGACGCTTAATCCGGCCCTGAGAAACTTCTGGACCACGCAGGCGCGAAATAAAGT
GCTCTATGGCGGGCGGTCATCGTCAAAATCATGGGATGCAGCCGGATTTGCAATATTCTTGGCAAATAAATACAGCCTGC
GTTTTTGCTGCGCTCGCCAGATCCAGAACAAAATTGAAGAATCGGTTTACACGCTTCTCAAAATTCAGATAGACCGGTTT
GGCCTGCGGCATCGTTTCCGCATTCTGAACAACAAAATCATTAACCGGGTTACCGGCTCGGAATTTGTTTTTTATGGGTT
ATGGCGCAACATCGAAGAAATTAAGTCACTGGAGGGGATCGATGTGTTGTGGCTGGAAGAAGCCCATGCACTGACGGAAT
ATCAATGGAAAATACTGGAGCCGACAATCCGTAAAGAGGGTTCAGAGTGTTGGTTTATTTTTAACCCTGGACTGGTCACC
GATTTCGTGTGGCGTAACTTTGTGGTCGATCCGCCAGAAGATACGCTGATTCGCAAAATCAACTACGACGAGAATCCATT
CCTTTCAGATACCATGCTGAAGGTTATCGATGCGGCAAGGCGTCGTGACCCGGAAGGGTTTGTGCATGTTTATGAGGGCG
TACCAGAGTCTGATGATGATGCGGCAATTATTAAGCTTTCGTGGATTGAAGCGGCTGTTGACGCGCATAAGGTTCTGGAT
TTCGGTCCTGAAGGACGTAAGCGCATCGGTTTCGATGTCGCCGACAGTGGCGCGGATAAGTGCGCCAACGTCTACCGTTA
TGGCTCAGTTATCTACTGGGCCGATGAATGGAAGGCCAAAGAGGACGAGTTGCTGAAGAGTTGCCAGCGCACTTACCAGG
CTGCAATGGAGCGCGATGCAGATATCGTTTACGACTCAATCGGTGTTGGCGCGTCGGCGGGCGCAAAGTTCTCGGAAATT
AACGATGACCGGAAGCGTGAGAACGCATACGCGCGACGTGTGAATTACCAGCGGTTTAACGCCGGTGCAGGTGTGCATGA
GCCAGATGACGAATACAACGGCATCCCCAACAAAGACTTTTTCGCAAATCTTAAGGCGCAGGCGTGGTGGCTGGTGGCTG
ACCGTTTCAGAAATACGTTTAACGCTATTAACAACGGAGAACAGTATCTTGTGGATGAGCTGATCAGCATAGATTCTCGT
TGTCCGTTGCTTGAAAAGCTGAAACTGGAACTGACAACGCCTCATCGCGATTTCGACCGTAACGGACGGGTGATGGTCGA
AAGTAAAAAAGACCTCGCAAAACGCGATATACCGTCACCAAACGTCGCCGACGCTTTCATTATGGCTTTCGCGCCAACCG
ACACATCGCTGGACATCTGGGAACAGTTGGGGAGACAGGCCTGA

Upstream 100 bases:

>100_bases
ACTGATTATCGTTTGGCGGCTACTGATAAGGTATCTCTCGAGGCTGACAGGCTGCGACGTGATGCTGGTATTGATGATGG
TAACGGAGAACGTGACCTGA

Downstream 100 bases:

>100_bases
TGGCACGAAACAAACAAGCCTCGCGACGAACGGTGCAGGCCACGGCCGACGGCTACGAGAACTTTGTCACCCGCGTGGGG
ATGCAGACGCCTAACCAGCA

Product: prophage terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTSTPISRPTLNPALRNFWTTQARNKVLYGGRSSSKSWDAAGFAIFLANKYSLRFCCARQIQNKIEESVYTLLKIQIDRF
GLRHRFRILNNKIINRVTGSEFVFYGLWRNIEEIKSLEGIDVLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVT
DFVWRNFVVDPPEDTLIRKINYDENPFLSDTMLKVIDAARRRDPEGFVHVYEGVPESDDDAAIIKLSWIEAAVDAHKVLD
FGPEGRKRIGFDVADSGADKCANVYRYGSVIYWADEWKAKEDELLKSCQRTYQAAMERDADIVYDSIGVGASAGAKFSEI
NDDRKRENAYARRVNYQRFNAGAGVHEPDDEYNGIPNKDFFANLKAQAWWLVADRFRNTFNAINNGEQYLVDELISIDSR
CPLLEKLKLELTTPHRDFDRNGRVMVESKKDLAKRDIPSPNVADAFIMAFAPTDTSLDIWEQLGRQA

Sequences:

>Translated_467_residues
MTSTPISRPTLNPALRNFWTTQARNKVLYGGRSSSKSWDAAGFAIFLANKYSLRFCCARQIQNKIEESVYTLLKIQIDRF
GLRHRFRILNNKIINRVTGSEFVFYGLWRNIEEIKSLEGIDVLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVT
DFVWRNFVVDPPEDTLIRKINYDENPFLSDTMLKVIDAARRRDPEGFVHVYEGVPESDDDAAIIKLSWIEAAVDAHKVLD
FGPEGRKRIGFDVADSGADKCANVYRYGSVIYWADEWKAKEDELLKSCQRTYQAAMERDADIVYDSIGVGASAGAKFSEI
NDDRKRENAYARRVNYQRFNAGAGVHEPDDEYNGIPNKDFFANLKAQAWWLVADRFRNTFNAINNGEQYLVDELISIDSR
CPLLEKLKLELTTPHRDFDRNGRVMVESKKDLAKRDIPSPNVADAFIMAFAPTDTSLDIWEQLGRQA
>Mature_466_residues
TSTPISRPTLNPALRNFWTTQARNKVLYGGRSSSKSWDAAGFAIFLANKYSLRFCCARQIQNKIEESVYTLLKIQIDRFG
LRHRFRILNNKIINRVTGSEFVFYGLWRNIEEIKSLEGIDVLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVTD
FVWRNFVVDPPEDTLIRKINYDENPFLSDTMLKVIDAARRRDPEGFVHVYEGVPESDDDAAIIKLSWIEAAVDAHKVLDF
GPEGRKRIGFDVADSGADKCANVYRYGSVIYWADEWKAKEDELLKSCQRTYQAAMERDADIVYDSIGVGASAGAKFSEIN
DDRKRENAYARRVNYQRFNAGAGVHEPDDEYNGIPNKDFFANLKAQAWWLVADRFRNTFNAINNGEQYLVDELISIDSRC
PLLEKLKLELTTPHRDFDRNGRVMVESKKDLAKRDIPSPNVADAFIMAFAPTDTSLDIWEQLGRQA

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 53691; Mature: 53560

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTPISRPTLNPALRNFWTTQARNKVLYGGRSSSKSWDAAGFAIFLANKYSLRFCCARQ
CCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
IQNKIEESVYTLLKIQIDRFGLRHRFRILNNKIINRVTGSEFVFYGLWRNIEEIKSLEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHCCCC
DVLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVTDFVWRNFVVDPPEDTLIRKI
EEEEEHHHHHHHHHHHEEECHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHEEEE
NYDENPFLSDTMLKVIDAARRRDPEGFVHVYEGVPESDDDAAIIKLSWIEAAVDAHKVLD
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHC
FGPEGRKRIGFDVADSGADKCANVYRYGSVIYWADEWKAKEDELLKSCQRTYQAAMERDA
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DIVYDSIGVGASAGAKFSEINDDRKRENAYARRVNYQRFNAGAGVHEPDDEYNGIPNKDF
CEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCHHEECCCCCCCCCCHHCCCCCCHHH
FANLKAQAWWLVADRFRNTFNAINNGEQYLVDELISIDSRCPLLEKLKLELTTPHRDFDR
HHCCCHHEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCC
NGRVMVESKKDLAKRDIPSPNVADAFIMAFAPTDTSLDIWEQLGRQA
CCCEEEECCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TSTPISRPTLNPALRNFWTTQARNKVLYGGRSSSKSWDAAGFAIFLANKYSLRFCCARQ
CCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
IQNKIEESVYTLLKIQIDRFGLRHRFRILNNKIINRVTGSEFVFYGLWRNIEEIKSLEGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHCCCC
DVLWLEEAHALTEYQWKILEPTIRKEGSECWFIFNPGLVTDFVWRNFVVDPPEDTLIRKI
EEEEEHHHHHHHHHHHEEECHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHEEEE
NYDENPFLSDTMLKVIDAARRRDPEGFVHVYEGVPESDDDAAIIKLSWIEAAVDAHKVLD
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHC
FGPEGRKRIGFDVADSGADKCANVYRYGSVIYWADEWKAKEDELLKSCQRTYQAAMERDA
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DIVYDSIGVGASAGAKFSEINDDRKRENAYARRVNYQRFNAGAGVHEPDDEYNGIPNKDF
CEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCHHEECCCCCCCCCCHHCCCCCCHHH
FANLKAQAWWLVADRFRNTFNAINNGEQYLVDELISIDSRCPLLEKLKLELTTPHRDFDR
HHCCCHHEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCC
NGRVMVESKKDLAKRDIPSPNVADAFIMAFAPTDTSLDIWEQLGRQA
CCCEEEECCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]