| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142311
Identifier: 29142311
GI number: 29142311
Start: 1944002
End: 1944391
Strand: Reverse
Name: 29142311
Synonym: t1885
Alternate gene names: NA
Gene position: 1944391-1944002 (Counterclockwise)
Preceding gene: 29142312
Following gene: 29142310
Centisome position: 40.58
GC content: 53.85
Gene sequence:
>390_bases ATGCCGACTCTTGATGTAACCGATGTTCTTTTCGACCCGGATTTTTGTGACTTCAACCTTTGGGTAACGCGTCGGGTACA GACAGTGGACGAAGACGGGATTGGTAGCGACAGCGAAGTTAAAACGCAGTTTGCCGGGGTTGTTACCGTTGACCGTTCAC TGGAAAACCGCCGCATGCAGTCCGGGCAGGTTATCAGTGGAGCAATCCTTATCGTGACGACTGAGCGACTCACGCAGGGG CAGACTGGCCGTGATGCCGATATCGTGACGTATCAGAACCGTGATTATCGTGTGACATTCGTCGACCCGTACACCGCATA TGGCGCCGGCTTTGTACAGGCGCATTGCGAGCTGCTGCCGTTCGATGGAGGATTTCCCGTTGAGCAATAA
Upstream 100 bases:
>100_bases CGGCGTGCTGCTGGTGAATCTCCGGGCACCACTTTGGCTAAGCCTCTTTACGATACTGGCAAATATCTCGCCTCAATAAC CCATGTAGTGAGGGATAAAG
Downstream 100 bases:
>100_bases TTCCAGTACGGAGCCGGGATGGCTTACACCTGTCAGCGGCGATCCGGATTATGACGAGGCGCTCGACAGGCTGTTAAGCC AGTGGGTACGCAACGTTTCC
Product: bacteriophage protein
Products: NA
Alternate protein names: Phage Head-Tail Adaptor
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPTLDVTDVLFDPDFCDFNLWVTRRVQTVDEDGIGSDSEVKTQFAGVVTVDRSLENRRMQSGQVISGAILIVTTERLTQG QTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGFPVEQ
Sequences:
>Translated_129_residues MPTLDVTDVLFDPDFCDFNLWVTRRVQTVDEDGIGSDSEVKTQFAGVVTVDRSLENRRMQSGQVISGAILIVTTERLTQG QTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGFPVEQ >Mature_128_residues PTLDVTDVLFDPDFCDFNLWVTRRVQTVDEDGIGSDSEVKTQFAGVVTVDRSLENRRMQSGQVISGAILIVTTERLTQGQ TGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGFPVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14402; Mature: 14271
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLDVTDVLFDPDFCDFNLWVTRRVQTVDEDGIGSDSEVKTQFAGVVTVDRSLENRRMQ CCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHCC SGQVISGAILIVTTERLTQGQTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLP CCCEECEEEEEEEECHHHCCCCCCCCEEEEECCCCEEEEEECCHHHHCCCEEEEEEEEEE FDGGFPVEQ CCCCCCCCC >Mature Secondary Structure PTLDVTDVLFDPDFCDFNLWVTRRVQTVDEDGIGSDSEVKTQFAGVVTVDRSLENRRMQ CCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCHHHCC SGQVISGAILIVTTERLTQGQTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLP CCCEECEEEEEEEECHHHCCCCCCCCEEEEECCCCEEEEEECCHHHHCCCEEEEEEEEEE FDGGFPVEQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA