| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is ycbG
Identifier: 29142278
GI number: 29142278
Start: 1910882
End: 1911334
Strand: Reverse
Name: ycbG
Synonym: t1851
Alternate gene names: 29142278
Gene position: 1911334-1910882 (Counterclockwise)
Preceding gene: 29142281
Following gene: 29142275
Centisome position: 39.89
GC content: 47.02
Gene sequence:
>453_bases ATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAATATCTGGTGAAAAAGCACCGCGAAGGGGAGTT GATCACCCGCTACGTGGAAGCCAGTGCTGCCCAGGAAGCCGTCAATTTGTTGTTGGCCCTCGAAAATGAACCGGTGCGGG TAAATGTCTGGATAGACAGGCATATGAATCCTGCCTTGCTTAATCGGATGAGACAAACCATTCGGGCAAGACGCAAACGA CACTTCAATGCGGAGCATCAGCATACGCGCAAAAAATCTATCGATTTAGAGTTTATGGTCTGGCAGCGTCTGGCGGGCCT TGCGCAGCGACGCGGTAAAACATTATCCGAAACGATTGTGCAACTGATAGAAGACGCGGAGCATAAAGAGAAATATGCCA CGCAAATGACCACGTTAAAGCAGGATTTACAGGCGTTATTAGGCAAGAAGTAA
Upstream 100 bases:
>100_bases TATGAAGACGTGTAACCATTCACAGGTTCGAGATTCTTTTCTTCAGATGGCTAAAAAACTGATATTCTGATAACAGTTAC ACGGTAACATTGGGATCACA
Downstream 100 bases:
>100_bases CGCTGAAAGGCGTTGCCACCCAGACCAGAGCAAAAAACCCCGCGAAGCGGGGTTTTTTATCAGACGGAAACTTAAGCCTG CGGCTGAGTTACCACGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDRHMNPALLNRMRQTIRARRKR HFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETIVQLIEDAEHKEKYATQMTTLKQDLQALLGKK
Sequences:
>Translated_150_residues MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDRHMNPALLNRMRQTIRARRKR HFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETIVQLIEDAEHKEKYATQMTTLKQDLQALLGKK >Mature_150_residues MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDRHMNPALLNRMRQTIRARRKR HFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETIVQLIEDAEHKEKYATQMTTLKQDLQALLGKK
Specific function: Unknown
COG id: COG3120
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0268 family
Homologues:
Organism=Escherichia coli, GI1787190, Length=149, Percent_Identity=89.261744966443, Blast_Score=279, Evalue=7e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YCBG_SALTI (Q8Z7S1)
Other databases:
- EMBL: AL627269 - EMBL: AE014613 - RefSeq: NP_455567.1 - RefSeq: NP_805620.1 - GeneID: 1067081 - GeneID: 1247514 - GenomeReviews: AE014613_GR - GenomeReviews: AL513382_GR - KEGG: stt:t1851 - KEGG: sty:STY1090 - HOGENOM: HBG297085 - OMA: ECGWKWK - ProtClustDB: PRK05097 - BioCyc: SENT209261:T1851-MONOMER - BioCyc: SENT220341:STY1090-MONOMER - HAMAP: MF_01073 - InterPro: IPR009390 - ProDom: PD033720
Pfam domain/function: PF06303 DUF1047
EC number: NA
Molecular weight: Translated: 17829; Mature: 17829
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDR CCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC HMNPALLNRMRQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETIV CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH QLIEDAEHKEKYATQMTTLKQDLQALLGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDR CCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC HMNPALLNRMRQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETIV CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH QLIEDAEHKEKYATQMTTLKQDLQALLGKK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504