Click here to switch to the map view.

The map label for this gene is yidK [H]

Identifier: 29142224

GI number: 29142224

Start: 1853423

End: 1854280

Strand: Direct

Name: yidK [H]

Synonym: t1793

Alternate gene names: 29142224

Gene position: 1853423-1854280 (Clockwise)

Preceding gene: 29142223

Following gene: 29142225

Centisome position: 38.68

GC content: 47.09

Gene sequence:

>858_bases
GTGACGCAGCAGGCGGATAAATTCTTTCCGGCTACGCAGTTCCACTGGAGCTGGACGGAAAGCACAGTACCTGTATTGAT
GATTGGTTTTCTGTTTGCCAATATTCAGCAATTTACTGCCAGTCAGGATGTGGTCCAACGCTATATCGTGACTGACTCCA
TAGAGGAAACGAAGAAAACATTACTTACAAATGCCAAACTGGTTGCTGTGATCCCTGTTTTCTTTTTTGCTATCGGCTCG
GCATTATTTGTCTACTATCAGCAACATCCACAATTATTACCGGCGGGATTCAACACTGGCGGCATTTTGCCCTTATTCGT
GGTCACCGAAATGCCAGTCGGCATTGCAGGGTTGATAATCTCCGCTATTTTCGCTGCCGCGCAGTCCAGCATCTCCAGCA
GCTTAAACAGCATTTCCAGTTGTTTTAATTCCGATATCTATCAGCGTTTGAGTCATAAAAAAGGAACGCCAGAAAACCGT
ATGAAAATAGCTAAGTTAGTTATTCTGGTCGCGGGCCTGATAAGTAGCGCGGCCTCGGTATGGCTGGTCATGGCCGATGA
ATCAGAAATCTGGGATGCATTTAATAGTCTGATAGGTCTGATGGGAGGGCCAATGACCGGTCTGTTCATGCTGGGCATTT
TCTTTAAACGAGCAAATGCCGGGAGTGCGGTTTTAGGAATTATTATCAGCGTCATTACCGTGCTGGGCACACGCTATGCC
ACTGACCTTAACTTCTTCTTTTATGGGGTCATTGGCTCGCTAAGCGTGGTGATCAGCGGCGTTATTTTCGCCCCGTTATT
TGCCCCGGCACCGCCATTGACGCTGGATGAAAAACCTGAACCAAAGGTGACATTATGA

Upstream 100 bases:

>100_bases
GACTGATGTTATTCAAGGTCTCTTACTTTCTGGCAGCGCGATACTGATTTTTATAGTGATATGTCTCAAAGTCCAGGGCG
GCATTGGTGAAATTTTTACG

Downstream 100 bases:

>100_bases
TTTCATGATACCACGCTATACCGACACAGCACACGGTGACGCCAACGCGCGGGGCGACAATACCGGGCCAGATATAAACC
ATCCGACAGATGGCGCGCTA

Product: membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTQQADKFFPATQFHWSWTESTVPVLMIGFLFANIQQFTASQDVVQRYIVTDSIEETKKTLLTNAKLVAVIPVFFFAIGS
ALFVYYQQHPQLLPAGFNTGGILPLFVVTEMPVGIAGLIISAIFAAAQSSISSSLNSISSCFNSDIYQRLSHKKGTPENR
MKIAKLVILVAGLISSAASVWLVMADESEIWDAFNSLIGLMGGPMTGLFMLGIFFKRANAGSAVLGIIISVITVLGTRYA
TDLNFFFYGVIGSLSVVISGVIFAPLFAPAPPLTLDEKPEPKVTL

Sequences:

>Translated_285_residues
MTQQADKFFPATQFHWSWTESTVPVLMIGFLFANIQQFTASQDVVQRYIVTDSIEETKKTLLTNAKLVAVIPVFFFAIGS
ALFVYYQQHPQLLPAGFNTGGILPLFVVTEMPVGIAGLIISAIFAAAQSSISSSLNSISSCFNSDIYQRLSHKKGTPENR
MKIAKLVILVAGLISSAASVWLVMADESEIWDAFNSLIGLMGGPMTGLFMLGIFFKRANAGSAVLGIIISVITVLGTRYA
TDLNFFFYGVIGSLSVVISGVIFAPLFAPAPPLTLDEKPEPKVTL
>Mature_284_residues
TQQADKFFPATQFHWSWTESTVPVLMIGFLFANIQQFTASQDVVQRYIVTDSIEETKKTLLTNAKLVAVIPVFFFAIGSA
LFVYYQQHPQLLPAGFNTGGILPLFVVTEMPVGIAGLIISAIFAAAQSSISSSLNSISSCFNSDIYQRLSHKKGTPENRM
KIAKLVILVAGLISSAASVWLVMADESEIWDAFNSLIGLMGGPMTGLFMLGIFFKRANAGSAVLGIIISVITVLGTRYAT
DLNFFFYGVIGSLSVVISGVIFAPLFAPAPPLTLDEKPEPKVTL

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI206597483, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI206597487, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI109659836, Length=129, Percent_Identity=32.5581395348837, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI109659839, Length=129, Percent_Identity=32.5581395348837, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI4507031, Length=210, Percent_Identity=27.1428571428571, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI256985183, Length=237, Percent_Identity=29.1139240506329, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1790113, Length=225, Percent_Identity=24, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32566512, Length=210, Percent_Identity=29.0476190476191, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221459588, Length=208, Percent_Identity=28.3653846153846, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24651739, Length=209, Percent_Identity=28.7081339712919, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28573698, Length=230, Percent_Identity=24.7826086956522, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574994, Length=224, Percent_Identity=30.8035714285714, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221459586, Length=210, Percent_Identity=24.2857142857143, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 30846; Mature: 30715

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQADKFFPATQFHWSWTESTVPVLMIGFLFANIQQFTASQDVVQRYIVTDSIEETKKT
CCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLTNAKLVAVIPVFFFAIGSALFVYYQQHPQLLPAGFNTGGILPLFVVTEMPVGIAGLII
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHH
SAIFAAAQSSISSSLNSISSCFNSDIYQRLSHKKGTPENRMKIAKLVILVAGLISSAASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHE
WLVMADESEIWDAFNSLIGLMGGPMTGLFMLGIFFKRANAGSAVLGIIISVITVLGTRYA
EEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TDLNFFFYGVIGSLSVVISGVIFAPLFAPAPPLTLDEKPEPKVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQQADKFFPATQFHWSWTESTVPVLMIGFLFANIQQFTASQDVVQRYIVTDSIEETKKT
CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLTNAKLVAVIPVFFFAIGSALFVYYQQHPQLLPAGFNTGGILPLFVVTEMPVGIAGLII
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHCCCHHHHHHH
SAIFAAAQSSISSSLNSISSCFNSDIYQRLSHKKGTPENRMKIAKLVILVAGLISSAASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHE
WLVMADESEIWDAFNSLIGLMGGPMTGLFMLGIFFKRANAGSAVLGIIISVITVLGTRYA
EEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TDLNFFFYGVIGSLSVVISGVIFAPLFAPAPPLTLDEKPEPKVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]