| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is htrB [H]
Identifier: 29142197
GI number: 29142197
Start: 1827371
End: 1828291
Strand: Direct
Name: htrB [H]
Synonym: t1765
Alternate gene names: 29142197
Gene position: 1827371-1828291 (Clockwise)
Preceding gene: 29142195
Following gene: 29142198
Centisome position: 38.13
GC content: 54.83
Gene sequence:
>921_bases ATGACGAAGTTGCCTAAGTTCTCCGTGGCCTTACTGCACCCGCGCTATTGGTTAACCTGGTTGGGTATAGGCGCGCTTTG GTTGGTCGTGCAACTCCCCTACCCGGTCATCTATAAATTGGGTTGCGCATTGGGCCACCTGGCGCGACGCGTAATGAAAC GCCGCGCGAAAATCGCCTATCGCAACCTTGAATTATGCTTTCCGGAAATGAGCGCGCAGGAACGCCACACCATGGTGGTC AAAAACTTTGAATCCGTCGGTATGGGCGTGATGGAAACCGGCATGGCCTGGTTCTGGCCCGATCGGCGAGTGAACCGCTG GATGGAAGCGAGCGGTCTGGAGCATATCCGTGAAGTTAAGGCGCAGGGGCTGGGGTTCATTCTGGTAGGAATACATTTCC TTACCCTTGAGTTTGGCGCCCGCATGTTTGGTATGCATAACCCGGGTATCGGCGTTTATCGCCCGAATGATAATCCGTTG CTCGACTGGTTACAGACCTGGGGGCGCTTACGCTCCAATAAATCGATGTTGGATCGCAAAGATCTGAAAGGTATGGTTAA GGCATTGAAAAGCGGCGAATTGATCTGGTATGCGCCGGATCACGATTATGGCCCGCGCGCCAGCGTCTTTGTACCGTTAT TCGCCGTCGACCAGGCCGCTACGACCTCCGGTACCTGGATGCTCGCGCGCATGTCTAAAGCCTGTATTATCCCCTCCGTG CCTCGCCGTAAACCCGACGGGAAAGGCTACGAACTGATCATCCTTCCTGCGGAATATTCGCCTCCGCTGGAGAGCGCAGA AGCGACTGCCGCATGGATGAATAAGATTGTTGAGCAGTGCATTATGATGGCGCCAGAGCAGTATATGTGGCTGCATCGCC GCTTTAAAACTCGCCCTGAAGGCGTACCGTCGCGCTATTGA
Upstream 100 bases:
>100_bases ACAATTGTCGATTTAATCGCCACTCTCCTGCTACATATTTTTGCTCAACGCAAAAAGATGCGAGAATACGGAGAATTGTT CGTTGAAAGACAGGATAGAA
Downstream 100 bases:
>100_bases CAGGATTGCAGCCGTCAGGCTGCAATTTTTCCCCTCTTTTAGCTTTAAAAGCTCCCCACATTGCGAGGCTGGTAAGGTCG GCGCATAATTATAATTAGTA
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTKLPKFSVALLHPRYWLTWLGIGALWLVVQLPYPVIYKLGCALGHLARRVMKRRAKIAYRNLELCFPEMSAQERHTMVV KNFESVGMGVMETGMAWFWPDRRVNRWMEASGLEHIREVKAQGLGFILVGIHFLTLEFGARMFGMHNPGIGVYRPNDNPL LDWLQTWGRLRSNKSMLDRKDLKGMVKALKSGELIWYAPDHDYGPRASVFVPLFAVDQAATTSGTWMLARMSKACIIPSV PRRKPDGKGYELIILPAEYSPPLESAEATAAWMNKIVEQCIMMAPEQYMWLHRRFKTRPEGVPSRY
Sequences:
>Translated_306_residues MTKLPKFSVALLHPRYWLTWLGIGALWLVVQLPYPVIYKLGCALGHLARRVMKRRAKIAYRNLELCFPEMSAQERHTMVV KNFESVGMGVMETGMAWFWPDRRVNRWMEASGLEHIREVKAQGLGFILVGIHFLTLEFGARMFGMHNPGIGVYRPNDNPL LDWLQTWGRLRSNKSMLDRKDLKGMVKALKSGELIWYAPDHDYGPRASVFVPLFAVDQAATTSGTWMLARMSKACIIPSV PRRKPDGKGYELIILPAEYSPPLESAEATAAWMNKIVEQCIMMAPEQYMWLHRRFKTRPEGVPSRY >Mature_305_residues TKLPKFSVALLHPRYWLTWLGIGALWLVVQLPYPVIYKLGCALGHLARRVMKRRAKIAYRNLELCFPEMSAQERHTMVVK NFESVGMGVMETGMAWFWPDRRVNRWMEASGLEHIREVKAQGLGFILVGIHFLTLEFGARMFGMHNPGIGVYRPNDNPLL DWLQTWGRLRSNKSMLDRKDLKGMVKALKSGELIWYAPDHDYGPRASVFVPLFAVDQAATTSGTWMLARMSKACIIPSVP RRKPDGKGYELIILPAEYSPPLESAEATAAWMNKIVEQCIMMAPEQYMWLHRRFKTRPEGVPSRY
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA. Has 10 fold selectivity for lauroyl- ACP over myristoyl-ACP [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=306, Percent_Identity=83.3333333333333, Blast_Score=546, Evalue=1e-157, Organism=Escherichia coli, GI87082094, Length=301, Percent_Identity=53.156146179402, Blast_Score=349, Evalue=1e-97, Organism=Escherichia coli, GI1788161, Length=306, Percent_Identity=29.7385620915033, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35154; Mature: 35023
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLPKFSVALLHPRYWLTWLGIGALWLVVQLPYPVIYKLGCALGHLARRVMKRRAKIAY CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLELCFPEMSAQERHTMVVKNFESVGMGVMETGMAWFWPDRRVNRWMEASGLEHIREVK HHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHH AQGLGFILVGIHFLTLEFGARMFGMHNPGIGVYRPNDNPLLDWLQTWGRLRSNKSMLDRK HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHH DLKGMVKALKSGELIWYAPDHDYGPRASVFVPLFAVDQAATTSGTWMLARMSKACIIPSV HHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCC PRRKPDGKGYELIILPAEYSPPLESAEATAAWMNKIVEQCIMMAPEQYMWLHRRFKTRPE CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GVPSRY CCCCCC >Mature Secondary Structure TKLPKFSVALLHPRYWLTWLGIGALWLVVQLPYPVIYKLGCALGHLARRVMKRRAKIAY CCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RNLELCFPEMSAQERHTMVVKNFESVGMGVMETGMAWFWPDRRVNRWMEASGLEHIREVK HHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHH AQGLGFILVGIHFLTLEFGARMFGMHNPGIGVYRPNDNPLLDWLQTWGRLRSNKSMLDRK HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHH DLKGMVKALKSGELIWYAPDHDYGPRASVFVPLFAVDQAATTSGTWMLARMSKACIIPSV HHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCC PRRKPDGKGYELIILPAEYSPPLESAEATAAWMNKIVEQCIMMAPEQYMWLHRRFKTRPE CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GVPSRY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]