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The map label for this gene is yciF [H]

Identifier: 29142077

GI number: 29142077

Start: 1701305

End: 1701808

Strand: Direct

Name: yciF [H]

Synonym: t1641

Alternate gene names: 29142077

Gene position: 1701305-1701808 (Clockwise)

Preceding gene: 29142076

Following gene: 29142078

Centisome position: 35.5

GC content: 42.86

Gene sequence:

>504_bases
ATGAATATCAAAACCGTTGAAGACCTTTTTATCCATCTACTTTCAGATACCTATAGTGCAGAAAAACAATTAACCAAGGC
TCTTCCTAAACTTGCCAGAGCCACGTCCAATGAAAAATTAAGCCAGGCCTTTCAATCTCATCTTGAAGAAACCCAGGGTC
AGATTGAACGTATTGATCAGATCGTCGAATCTGAATCTGGCATTAAACTGAAAAGAATGAAATGCGTCGCTATGGAAGGG
CTGATTGAAGAAGCCAATGAAGTCATCGAAAGTACGGAGAAAAACGAAGTACGCGATGCAGCGCTTATCGCCGCGGCGCA
AAAAGTCGAGCATTACGAAATCGCCAGCTACGGCACGCTAGCCACCCTGGCCGAGCAGCTCGGCTATAGCAAAGCATTAA
AACTGCTCAAAGAAACCCTCGACGAGGAAAAACAAACTGATTTAAAACTTACCGATTTAGCAGTCAGCAATGTTAATAAA
AGTGCTGAACGCAAATCGAAATAA

Upstream 100 bases:

>100_bases
ATAATTCCTGATTTACTGTAATGTAAATATAACACATGCTTTTATCAAGCAATCTGCGAGTCTTCTGGCTCGCAGTATTT
TGCCCAGGAGAATTAGATTT

Downstream 100 bases:

>100_bases
TATTTTTAATTATCAGCTTGCATGATTCCGATTTTATTATCGGAGCAGATTATCACGCATTGAGGAATGTAAAATGAATT
ATACTGAACATTATCATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEG
LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNK
SAERKSK

Sequences:

>Translated_167_residues
MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEG
LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNK
SAERKSK
>Mature_167_residues
MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQIVESESGIKLKRMKCVAMEG
LIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNK
SAERKSK

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=166, Percent_Identity=86.7469879518072, Blast_Score=294, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18652; Mature: 18652

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IVESESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNKSAERKSK
HHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MNIKTVEDLFIHLLSDTYSAEKQLTKALPKLARATSNEKLSQAFQSHLEETQGQIERIDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IVESESGIKLKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLAEQLGYSKALKLLKETLDEEKQTDLKLTDLAVSNVNKSAERKSK
HHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]