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The map label for this gene is yecS [H]

Identifier: 29141979

GI number: 29141979

Start: 1592147

End: 1592794

Strand: Direct

Name: yecS [H]

Synonym: t1537

Alternate gene names: 29141979

Gene position: 1592147-1592794 (Clockwise)

Preceding gene: 29141978

Following gene: 29141980

Centisome position: 33.23

GC content: 42.59

Gene sequence:

>648_bases
ATGTCATCAGGTAATATGCTGGCTATCTTTTATTTCCTATTGGAAGGGATTGGTAATACGCTGCTTGTAACCTTTACCTG
TTTTCTCTCAGCGTTTTTGACCGGGCTTACAGTCGCCGTATTACGGCGACTATCCCCCCTTCCACTACAGAAGATACTCG
ACGTACTGGTCTTTATTCTTCGGGGAATTCCAATACTTATTGCTGTTTTTCTTGTTTATTTTGGATTGCCATCGATTGGC
ATATATGTTTCACCTCTGGTGGCCATGAACCTCAGCGTCGGCTTAATCAGCGGGAGTTATCTTGCCGAGGTGTTCAGAGG
GGCGCTTAAATTAGTTGAGCCATTCGAAATAACGGTAGCGAAAGTAGCAGGAATGCGTCAATTACAGGTTATAATAAATA
TTGAACTGCCACAGATGTTGCGATTTTCTGTGCCCGGTATTATCAATGAGTTTTCTTCTGTATTAAAAGCGACGCCCTTT
GCTTATACTGTAGGCATCGCTGAAATAACGAAGCAGGCAATGTCACTGACAGCCATCACGCTGAACGGGTTACAGATCTA
TACCCTTGCCGGGGTATTATATTTCATTATTTATAAAGCATTTACTCTTCTGGCCGGAGTGTTTGAGAAAAAATATCGCA
TCAGTTGA

Upstream 100 bases:

>100_bases
GAAAGGCTCTCCCGTGCGCGATGATTTTAACTTATGGCTTAAAGAGCAAGGGCCACAAAAAATATCTGGCATCGTTGATA
ACTGGATGAAATAGTAAGCT

Downstream 100 bases:

>100_bases
AACATAAAAATAGAGGTGATACTCATGGCTTTACTGGAACTAAAAGAGATAAGTAAGGAATATTCAGGAAAAAAGGTTCT
TGATGCGGTTAGTTTGAAAA

Product: ABC amino acid transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSSGNMLAIFYFLLEGIGNTLLVTFTCFLSAFLTGLTVAVLRRLSPLPLQKILDVLVFILRGIPILIAVFLVYFGLPSIG
IYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVIINIELPQMLRFSVPGIINEFSSVLKATPF
AYTVGIAEITKQAMSLTAITLNGLQIYTLAGVLYFIIYKAFTLLAGVFEKKYRIS

Sequences:

>Translated_215_residues
MSSGNMLAIFYFLLEGIGNTLLVTFTCFLSAFLTGLTVAVLRRLSPLPLQKILDVLVFILRGIPILIAVFLVYFGLPSIG
IYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVIINIELPQMLRFSVPGIINEFSSVLKATPF
AYTVGIAEITKQAMSLTAITLNGLQIYTLAGVLYFIIYKAFTLLAGVFEKKYRIS
>Mature_214_residues
SSGNMLAIFYFLLEGIGNTLLVTFTCFLSAFLTGLTVAVLRRLSPLPLQKILDVLVFILRGIPILIAVFLVYFGLPSIGI
YVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVAKVAGMRQLQVIINIELPQMLRFSVPGIINEFSSVLKATPFA
YTVGIAEITKQAMSLTAITLNGLQIYTLAGVLYFIIYKAFTLLAGVFEKKYRIS

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=30.8457711442786, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1787030, Length=204, Percent_Identity=25.4901960784314, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788646, Length=185, Percent_Identity=27.5675675675676, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788645, Length=165, Percent_Identity=27.8787878787879, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787087, Length=204, Percent_Identity=23.5294117647059, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23527; Mature: 23396

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGNMLAIFYFLLEGIGNTLLVTFTCFLSAFLTGLTVAVLRRLSPLPLQKILDVLVFIL
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RGIPILIAVFLVYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KVAGMRQLQVIINIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAIT
HHHCHHHEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNGLQIYTLAGVLYFIIYKAFTLLAGVFEKKYRIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSGNMLAIFYFLLEGIGNTLLVTFTCFLSAFLTGLTVAVLRRLSPLPLQKILDVLVFIL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RGIPILIAVFLVYFGLPSIGIYVSPLVAMNLSVGLISGSYLAEVFRGALKLVEPFEITVA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KVAGMRQLQVIINIELPQMLRFSVPGIINEFSSVLKATPFAYTVGIAEITKQAMSLTAIT
HHHCHHHEEEEEECCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNGLQIYTLAGVLYFIIYKAFTLLAGVFEKKYRIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]