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The map label for this gene is ssaO [H]

Identifier: 29141745

GI number: 29141745

Start: 1351401

End: 1351778

Strand: Direct

Name: ssaO [H]

Synonym: t1284

Alternate gene names: 29141745

Gene position: 1351401-1351778 (Clockwise)

Preceding gene: 29141744

Following gene: 29141746

Centisome position: 28.2

GC content: 42.86

Gene sequence:

>378_bases
ATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCAGCAAACTTACCGTGCTTGATCAGCAGCAACA
GGCGATTATTACTGAACAGCAGATTTGCCAGACGCGCGCTTTAGCAGTGACTACCAGACTGAAAGAATTAATGGGCTGGC
AAGGTACGTTATCTTGTCATTTATTGTTGGATAAGAAACAACAAATGGCCGGACTATTCACTCAGGCGCAGAGCTTTTTG
ACGCAACGGCAGCAGTTAGAGAATCAGTATCAGCAGCTTGTCTCCAGGCGAAGCGAATTACAGAAGAATTTTAATGCGCT
TATGAAAAAGAAAGAAAAAATTACTATGGTATTAAGCGATGCGTATTACCAAAGTTGA

Upstream 100 bases:

>100_bases
CCTATCCGGATATTTGCACATTTTTGCGACAAAGTAAGGATGAAGTATGCGGACCCGAGCTACTCATAGAAAAATTACAT
CAAATACTCACCGAGTGATC

Downstream 100 bases:

>100_bases
GGGAAGTCTTGGGTTGCCATGCCAGTCTTATCAGGATGATAACGAGGCGGAGGCGGAACGTATGGACTTTGAACAACTCA
TGCACCAGGCATTACCCATT

Product: type III secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

Sequences:

>Translated_125_residues
METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS
>Mature_125_residues
METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14663; Mature: 14663

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLLDKKQQMAGLFTQAQSFLTQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYYQS
HHHCC
>Mature Secondary Structure
METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLLDKKQQMAGLFTQAQSFLTQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYYQS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]