Click here to switch to the map view.

The map label for this gene is ssaN [H]

Identifier: 29141744

GI number: 29141744

Start: 1350097

End: 1351398

Strand: Direct

Name: ssaN [H]

Synonym: t1283

Alternate gene names: 29141744

Gene position: 1350097-1351398 (Clockwise)

Preceding gene: 29141743

Following gene: 29141745

Centisome position: 28.17

GC content: 51.15

Gene sequence:

>1302_bases
ATGAAGAATGAATTGATGCAACGTCTGAGGCTGAAATATCCGCCCCCCGATGGTTATTGTCGATGGGGCCGAATTCAAGA
TGTCAGCGCAACGTTGTTAAATGCGTGGTTGCCTGGGGTATTTATGGGAGAGTTGTGCTGTATAAAGCCTGGAGAAGAAC
TTGCTGAAGTCGTGGGGATTAATGGCAGCAAAGCTTTGCTATCTCCTTTTACGAGTACTATCGGGCTTCACTGCGGGCAG
CAAGTGATGGCCTTAAGGCGACGCCATCAGGTTCCCGTGGGCGAAGCGTTATTAGGGCGAGTCATTGATGGTTTTGGTCG
TCCCCTTGATGGCTGCGAACTGCCCGACGTCTGCTGGAAAGACTATGATGCAATGCCTCCTCCCGCAATGGTTCGACAGC
CTATCACTCAACCATTAATGACGGGGATTCGCGCTATTGATAGCGTTGCGACCTGTGGTGAAGGGCAACGAGTGGGTATT
TTTTCTGCTCCTGGCGTGGGGAAAAGCACGCTTCTGGCGATGCTGTGTAATGCGCCAGACGCAGACTGCAATGTTCTGGT
GTTAATTGGTGAACGTGGACGAGAAGTCCGCGAGTTCATCGATTTTACACTGTCTGAAGAGACCCGAAAACGTTGTGTCA
TTGTTGTCGCAACCTCTGACAGACCCGCCTTAGAGCGCGTGAGGGCGCTGTTTGTGGCCACCACGATAGCAGAATTTTTT
CGCGATAATGGAAAACGAGTCGTCTTGCTTGCCGACTCACTGACGCGTTATGCCAGGGCCGCACGGGAAATCGCTCTGGC
CGCCGGAGAGACCGCAGTTTCTGGAGAATATCCGCCAGGCGTATTTAGTGCATTGCCACGACTTTTAGAACGTACAGGAA
TGGGGGAAAAAGGCAGTATTACCGCATTTTATACGGTCCTGGTGGAAGGCGATGATATGAATGAGCCGTTGGCGGATGAA
GTCCGTTCACTGCTTGACGGACATATTGTGCTATCCCGGCGGCTTGCAGAGAGGGGGCATTATCCTGCCATTGACGTGTT
GGCAACGCTCAGCCGCGTTTTTCCAGTCGTTACCAGCCATGAGCATCGTCAACTGGCGGCTATATTGCGACGGCGCCTGG
CGCTTTACCAGGAGGTTGAACTGTTAATACGCATTGGGGAATACCAGCGAGGAGTTGATACTGATACCGATAAAGCCATT
GATACCTATCCGGATATTTGCACATTTTTGCGACAAAGTAAGGATGAAGTATGCGGACCCGAGCTACTCATAGAAAAATT
ACATCAAATACTCACCGAGTGA

Upstream 100 bases:

>100_bases
TTGTTCGACGTACCGATTTTGTCATGGCAGGAATTAGGAGAGGAGAGCCTTATACAAGTGGTAGAAAGTATTGACCTTAG
CGAAGAGGAGTTGGCGGACA

Downstream 100 bases:

>100_bases
TCATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCAGCAAACTTACCGTGCTTGATCAGCAGCAA
CAGGCGATTATTACTGAACA

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGINGSKALLSPFTSTIGLHCGQ
QVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGI
FSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADE
VRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAI
DTYPDICTFLRQSKDEVCGPELLIEKLHQILTE

Sequences:

>Translated_433_residues
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGINGSKALLSPFTSTIGLHCGQ
QVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGI
FSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADE
VRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAI
DTYPDICTFLRQSKDEVCGPELLIEKLHQILTE
>Mature_433_residues
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGINGSKALLSPFTSTIGLHCGQ
QVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGI
FSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADE
VRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAI
DTYPDICTFLRQSKDEVCGPELLIEKLHQILTE

Specific function: Probable Catalytic Subunit Of A Protein Translocase For Flagellum-Specific Export, Or A Proton Translocase Involved In Local Circuits At The Flagellum. May Be Involved In A Specialized Protein Export Pathway That Proceeds Without Signal Peptide Cleavage.

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=328, Percent_Identity=31.0975609756098, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI50345984, Length=311, Percent_Identity=29.5819935691318, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI4757810, Length=311, Percent_Identity=29.5819935691318, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI19913424, Length=277, Percent_Identity=28.158844765343, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI19913428, Length=355, Percent_Identity=27.6056338028169, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI19913426, Length=321, Percent_Identity=28.0373831775701, Blast_Score=108, Evalue=1e-23,
Organism=Escherichia coli, GI1788251, Length=427, Percent_Identity=44.0281030444965, Blast_Score=311, Evalue=4e-86,
Organism=Escherichia coli, GI1790170, Length=320, Percent_Identity=31.875, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1790172, Length=367, Percent_Identity=27.5204359673025, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1790217, Length=240, Percent_Identity=31.25, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144756, Length=327, Percent_Identity=30.5810397553517, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71988080, Length=339, Percent_Identity=27.7286135693215, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71988063, Length=339, Percent_Identity=27.7286135693215, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17565854, Length=242, Percent_Identity=30.9917355371901, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17570191, Length=353, Percent_Identity=27.1954674220963, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17510931, Length=354, Percent_Identity=27.1186440677966, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71988074, Length=336, Percent_Identity=27.0833333333333, Blast_Score=104, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6319370, Length=339, Percent_Identity=31.2684365781711, Blast_Score=144, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6322581, Length=344, Percent_Identity=30.2325581395349, Blast_Score=139, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6319603, Length=347, Percent_Identity=27.3775216138329, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6320016, Length=245, Percent_Identity=26.9387755102041, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24638766, Length=346, Percent_Identity=30.0578034682081, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI28574560, Length=326, Percent_Identity=31.2883435582822, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24658560, Length=340, Percent_Identity=29.1176470588235, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24583988, Length=243, Percent_Identity=30.8641975308642, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24583986, Length=243, Percent_Identity=30.8641975308642, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24583984, Length=243, Percent_Identity=30.8641975308642, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24583992, Length=243, Percent_Identity=30.8641975308642, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI20129479, Length=241, Percent_Identity=29.8755186721992, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281361666, Length=356, Percent_Identity=26.685393258427, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646341, Length=356, Percent_Identity=26.685393258427, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI17136796, Length=356, Percent_Identity=26.685393258427, Blast_Score=113, Evalue=3e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005714
- InterPro:   IPR013380 [H]

Pfam domain/function: PF00006 ATP-synt_ab [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 47839; Mature: 47839

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGI
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEEECCCCHHHHHHHCC
NGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWK
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHC
DYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCC
ADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSI
HCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCE
TAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSH
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
EHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHCHHCCCCH
ELLIEKLHQILTE
HHHHHHHHHHHCC
>Mature Secondary Structure
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGI
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEEECCCCHHHHHHHCC
NGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWK
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHC
DYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCC
ADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSI
HCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCE
TAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSH
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
EHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHCHHCCCCH
ELLIEKLHQILTE
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]