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The map label for this gene is ssaM [H]

Identifier: 29141742

GI number: 29141742

Start: 1347709

End: 1348077

Strand: Direct

Name: ssaM [H]

Synonym: t1281

Alternate gene names: 29141742

Gene position: 1347709-1348077 (Clockwise)

Preceding gene: 29141741

Following gene: 29141743

Centisome position: 28.12

GC content: 42.28

Gene sequence:

>369_bases
ATGGATTGGGATCTCATTACTGAACGTAATATTCAGCTTTTTATTCAATTAGCAGGATTAGCTGAACGGCCTTTAGCAAC
CAATATGTTCTGGCGGCAAGGACAATATGAAACCTGTCTAAACTATCATAATGGTCGTATTCACTTATGTCAGATACTCA
AGCAAACCTTCTTAGACGAAGAACTGCTTTTTAAAGCGTTGGCTAACTGGAAACCCGCAGCGTTCCAGGGTATTCCTCAA
CGATTATTTTTGTTGCGCGATGGGCTTGCAATGAGTTGTTCTCCACCTCTTTCCAGCTCCGCCGAGCTCTGGTTACGATT
ACATCATCGACAAATAAAATTTCTGGAGTCGCAATGCGTTCATGGTTAG

Upstream 100 bases:

>100_bases
CGAAACGCTTCGTGAAGTAAAGATAAATCAGGTTTTATTCTGATACCTGGCTTTCAATATTTAGGTAAATTGGCTTTCTG
GCTCATCATGAGGCGTCAGG

Downstream 100 bases:

>100_bases
GTGAGGGAATCAGGGCGCAACAGTGGCTCAGTGTATGCGCGGGTCGTCAGGATATGGTTCTGGCGACGGTGTTATTAATC
GCTATCGTGATGATGCTGTT

Product: pathogenicity island protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETCLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG

Sequences:

>Translated_122_residues
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETCLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG
>Mature_122_residues
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETCLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017033 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14252; Mature: 14252

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETCLNYHNGRIHLCQILKQTFLDE
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCH
ELLFKALANWKPAAFQGIPQRLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCV
HHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
HG
CC
>Mature Secondary Structure
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETCLNYHNGRIHLCQILKQTFLDE
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCH
ELLFKALANWKPAAFQGIPQRLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCV
HHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
HG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]