Click here to switch to the map view.

The map label for this gene is ssaL [H]

Identifier: 29141741

GI number: 29141741

Start: 1346659

End: 1347651

Strand: Direct

Name: ssaL [H]

Synonym: t1280

Alternate gene names: 29141741

Gene position: 1346659-1347651 (Clockwise)

Preceding gene: 29141740

Following gene: 29141742

Centisome position: 28.1

GC content: 46.32

Gene sequence:

>993_bases
ATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGGCCTGGTTATAGAGGAACAAGAGGT
TATTTCGCCTTCAATGTTAGCTCTCCATGAGTTACAGGAAACGGCGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAG
GAATGGCGCTGAGTGGTAAACTGCGCGAAAGTAATAAATTCACTGATGCTGAGAAACTGGAGCGCAGGCAGCAGGCTTTG
CTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAGCGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTT
ACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGC
AATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGAT
ACCGCTACGCTGTCCTCGCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGAAATGCCCTTATCGCAGTGGTTCAG
ACGCGTGGCAGACTGGCCGGATCGCGGTGAACGGGTCCGTATTTTGCTAAGAGCAATAGCCTTTGAACTTAGCATATGCA
TCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGCTTGCGTCGTTTGTTGTTATTCCTTGGCCTTGAAAAA
GAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATCATTTGTGAGCG
CTGGCTTTTCAGCGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGTTACTCCAAC
AACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTT
CGTGAAGTAAAGATAAATCAGGTTTTATTCTGA

Upstream 100 bases:

>100_bases
GAACTTTCCTCAACACGATATGCCGTTGAGTTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTAATGG
TGAAGATAAAAGAGGTAGCG

Downstream 100 bases:

>100_bases
TACCTGGCTTTCAATATTTAGGTAAATTGGCTTTCTGGCTCATCATGAGGCGTCAGGATGGATTGGGATCTCATTACTGA
ACGTAATATTCAGCTTTTTA

Product: secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNIKINEIKMTPPTAFTPGLVIEEQEVISPSMLALHELQETAGAALYETMEEIGMALSGKLRESNKFTDAEKLERRQQAL
LRLIKQIQEDNGAALRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRGERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKINQVLF

Sequences:

>Translated_330_residues
MNIKINEIKMTPPTAFTPGLVIEEQEVISPSMLALHELQETAGAALYETMEEIGMALSGKLRESNKFTDAEKLERRQQAL
LRLIKQIQEDNGAALRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRGERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKINQVLF
>Mature_330_residues
MNIKINEIKMTPPTAFTPGLVIEEQEVISPSMLALHELQETAGAALYETMEEIGMALSGKLRESNKFTDAEKLERRQQAL
LRLIKQIQEDNGAALRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRGERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKINQVLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010812
- InterPro:   IPR013351 [H]

Pfam domain/function: PF07201 HrpJ [H]

EC number: NA

Molecular weight: Translated: 37827; Mature: 37827

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKINEIKMTPPTAFTPGLVIEEQEVISPSMLALHELQETAGAALYETMEEIGMALSGK
CCCEEEEEEECCCCCCCCCCEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LRESNKFTDAEKLERRQQALLRLIKQIQEDNGAALRPLTEENSDPDLQNAYQIIALAMAL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
TAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVDTATLSSLKRFMQQAIDNDEM
HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PLSQWFRRVADWPDRGERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCH
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFM
HHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LIPDNCFNDEDQREQILETLREVKINQVLF
EECCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIKINEIKMTPPTAFTPGLVIEEQEVISPSMLALHELQETAGAALYETMEEIGMALSGK
CCCEEEEEEECCCCCCCCCCEECHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LRESNKFTDAEKLERRQQALLRLIKQIQEDNGAALRPLTEENSDPDLQNAYQIIALAMAL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH
TAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVDTATLSSLKRFMQQAIDNDEM
HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PLSQWFRRVADWPDRGERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCH
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFM
HHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LIPDNCFNDEDQREQILETLREVKINQVLF
EECCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]